Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | KME82_RS20060 | Genome accession | NZ_CP076103 |
| Coordinates | 4823968..4824399 (+) | Length | 143 a.a. |
| NCBI ID | WP_215495575.1 | Uniprot ID | - |
| Organism | Lysobacter capsici strain NF87_2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4818968..4829399
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KME82_RS20050 (KME82_20050) | - | 4820300..4821925 (+) | 1626 | WP_215495573.1 | ATP-binding protein | - |
| KME82_RS20055 (KME82_20055) | pilR | 4822011..4823420 (+) | 1410 | WP_215495574.1 | sigma-54 dependent transcriptional regulator | Regulator |
| KME82_RS20060 (KME82_20060) | pilA2 | 4823968..4824399 (+) | 432 | WP_215495575.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| KME82_RS20065 (KME82_20065) | pilA2 | 4824969..4825382 (+) | 414 | WP_215495576.1 | pilin | Machinery gene |
| KME82_RS20070 (KME82_20070) | - | 4825492..4827384 (+) | 1893 | WP_215495577.1 | hypothetical protein | - |
| KME82_RS20075 (KME82_20075) | - | 4827540..4828466 (-) | 927 | WP_215495578.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| KME82_RS20080 (KME82_20080) | - | 4828459..4829349 (-) | 891 | WP_215495579.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14681.89 Da Isoelectric Point: 7.5880
>NTDB_id=571843 KME82_RS20060 WP_215495575.1 4823968..4824399(+) (pilA2) [Lysobacter capsici strain NF87_2]
MKKQQGFTLIELMIVIAILGILIAIALPAYQDYTIRTKNVECLNVAAAAKLAVSETAQDRGTLAAITATNTGYSFVASSY
CATVAITAGTGVITATTVGGPTGTGGPAVAFTLTPTQAAGRIEWDCSAPANTKQSQIPAECRQ
MKKQQGFTLIELMIVIAILGILIAIALPAYQDYTIRTKNVECLNVAAAAKLAVSETAQDRGTLAAITATNTGYSFVASSY
CATVAITAGTGVITATTVGGPTGTGGPAVAFTLTPTQAAGRIEWDCSAPANTKQSQIPAECRQ
Nucleotide
Download Length: 432 bp
>NTDB_id=571843 KME82_RS20060 WP_215495575.1 4823968..4824399(+) (pilA2) [Lysobacter capsici strain NF87_2]
ATGAAGAAGCAGCAAGGCTTTACCCTGATCGAATTGATGATCGTCATCGCCATCCTCGGCATCCTGATCGCGATCGCTCT
GCCGGCGTACCAGGACTACACGATCCGCACCAAGAACGTTGAGTGCCTGAATGTCGCCGCCGCGGCCAAGCTGGCCGTGT
CGGAAACCGCGCAGGACCGTGGCACCTTGGCCGCGATCACCGCGACCAACACCGGCTACAGCTTCGTCGCCAGCAGCTAC
TGCGCCACCGTCGCCATCACTGCCGGTACCGGCGTGATCACCGCGACCACCGTTGGCGGCCCGACCGGCACCGGCGGCCC
GGCCGTTGCGTTCACCCTGACCCCGACGCAGGCCGCTGGCCGCATCGAATGGGATTGCTCGGCTCCGGCCAACACCAAGC
AGTCGCAGATTCCGGCTGAATGCCGTCAGTAA
ATGAAGAAGCAGCAAGGCTTTACCCTGATCGAATTGATGATCGTCATCGCCATCCTCGGCATCCTGATCGCGATCGCTCT
GCCGGCGTACCAGGACTACACGATCCGCACCAAGAACGTTGAGTGCCTGAATGTCGCCGCCGCGGCCAAGCTGGCCGTGT
CGGAAACCGCGCAGGACCGTGGCACCTTGGCCGCGATCACCGCGACCAACACCGGCTACAGCTTCGTCGCCAGCAGCTAC
TGCGCCACCGTCGCCATCACTGCCGGTACCGGCGTGATCACCGCGACCACCGTTGGCGGCCCGACCGGCACCGGCGGCCC
GGCCGTTGCGTTCACCCTGACCCCGACGCAGGCCGCTGGCCGCATCGAATGGGATTGCTCGGCTCCGGCCAACACCAAGC
AGTCGCAGATTCCGGCTGAATGCCGTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
49.296 |
99.301 |
0.49 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.592 |
99.301 |
0.483 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
41.212 |
100 |
0.476 |
| comP | Acinetobacter baylyi ADP1 |
43.333 |
100 |
0.455 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.49 |
100 |
0.434 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.355 |
100 |
0.427 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.135 |
98.601 |
0.406 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.143 |
97.902 |
0.364 |
| pilA | Pseudomonas aeruginosa PAK |
33.766 |
100 |
0.364 |