Detailed information NTG0556030

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J9174_RS05575
• Genome accession: NZ_CP072837
• Coordinates: 1073259..1073981 (+)
• Length: 240 a.a.
• NCBI ID: WP_233436642.1
• Uniprot ID: -
• Organism: Macrococcoides canis strain 19/EPI0118
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1068259..1078981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J9174_RS05555 (J9174_05555)	ylqF	1069112..1069984 (+)	873	WP_138070960.1	ribosome biogenesis GTPase YlqF	-
J9174_RS05560 (J9174_05560)	-	1069974..1070762 (+)	789	WP_210152936.1	ribonuclease HII	-
J9174_RS05565 (J9174_05565)	sucC	1070868..1072037 (+)	1170	WP_138070962.1	ADP-forming succinate--CoA ligase subunit beta	-
J9174_RS05570 (J9174_05570)	sucD	1072053..1072961 (+)	909	WP_086042373.1	succinate--CoA ligase subunit alpha	-
J9174_RS05575 (J9174_05575)	dprA	1073259..1073981 (+)	723	WP_233436642.1	DNA-processing protein DprA	Machinery gene
J9174_RS05580 (J9174_05580)	topA	1074067..1076136 (+)	2070	WP_210153020.1	type I DNA topoisomerase	-
J9174_RS05585 (J9174_05585)	trmFO	1076301..1077602 (+)	1302	WP_210152937.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
J9174_RS05590 (J9174_05590)	-	1077662..1078534 (+)	873	WP_210152938.1	tyrosine recombinase XerC	-

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 26958.79 Da
• Isoelectric Point: 5.3385

>NTDB_id=556030 J9174_RS05575 WP_233436642.1 1073259..1073981(+) (dprA) [Macrococcoides canis strain 19/EPI0118]
MTKFQNLKSSMLLEELESKEITPLYFDSETYPQLLLEIYDYPFILFTKGNINILNYSNALAIVGSRDATNYTANALDQIV
PELIKNNIFIVSGLAKGADNYAHLACNFYGGHTIGVLAYGHDFVYPTETALIRKLMEKNHIVISEYPPSTPIQKFRFPER
NRIISGLAQGVLITEAKERSGSLITLDQGLEQDRNIYCLPGPINHELSSGCNKRIKEGAKLVQCAQDILEDYSFPDISKN

Nucleotide

• Length: 723 bp

>NTDB_id=556030 J9174_RS05575 WP_233436642.1 1073259..1073981(+) (dprA) [Macrococcoides canis strain 19/EPI0118]
TTGACAAAATTTCAGAATTTAAAGAGCAGCATGCTACTTGAAGAGCTTGAAAGCAAGGAGATTACCCCCCTTTATTTTGA
CTCTGAAACGTACCCCCAACTACTACTTGAAATTTATGATTACCCTTTCATTTTATTCACAAAAGGCAATATTAATATCC
TTAATTATTCGAATGCTTTAGCGATTGTAGGGAGCAGGGATGCGACGAATTATACTGCGAATGCGCTCGACCAGATTGTA
CCTGAACTTATCAAAAATAATATATTTATTGTCAGTGGCCTTGCAAAAGGGGCGGATAATTATGCACATCTTGCGTGTAA
CTTCTATGGTGGCCATACGATTGGAGTACTTGCATATGGTCATGATTTTGTTTATCCGACAGAAACTGCGCTCATTAGAA
AATTGATGGAAAAAAATCATATCGTTATAAGTGAATATCCACCATCGACACCGATTCAGAAGTTTAGATTTCCAGAACGT
AATAGAATTATCAGTGGTCTTGCTCAAGGGGTACTGATTACAGAAGCGAAAGAGAGAAGCGGGAGTCTCATTACGCTTGA
TCAGGGACTAGAACAAGACAGAAATATCTATTGCCTACCTGGACCTATCAATCATGAACTGTCATCCGGATGTAACAAAA
GAATAAAAGAAGGTGCAAAATTAGTACAATGTGCACAAGACATCCTGGAAGATTATTCTTTTCCTGATATTTCAAAAAAT
TAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (17-223)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus N315	51.304	95.833	0.492
dprA	Staphylococcus aureus MW2	51.304	95.833	0.492
dprA/cilB/dalA	Streptococcus mitis SK321	44.091	91.667	0.404
dprA	Streptococcus mutans UA159	41.026	97.5	0.4
dprA	Lactococcus lactis subsp. cremoris KW2	44.444	90	0.4
dprA	Legionella pneumophila strain ERS1305867	43.602	87.917	0.383
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus pneumoniae D39	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus pneumoniae R6	44.66	85.833	0.383
dprA	Glaesserella parasuis strain SC1401	39.738	95.417	0.379
dprA	Bacillus subtilis subsp. subtilis str. 168	40.909	91.667	0.375
dprA	Haemophilus influenzae Rd KW20	42.512	86.25	0.367