Detailed information NTG0553006

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: J7T60_RS08565
• Genome accession: NZ_CP072436
• Coordinates: 1636866..1637258 (-)
• Length: 130 a.a.
• NCBI ID: WP_372433443.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24735
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1631866..1642258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T60_RS08530 (J7T60_08430)	dapD	1632170..1632868 (-)	699	WP_002951996.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
J7T60_RS08535 (J7T60_08435)	-	1632954..1633708 (-)	755	Protein_1624	HAD family hydrolase	-
J7T60_RS08540 (J7T60_08440)	-	1633823..1634656 (-)	834	WP_179971066.1	methyltransferase domain-containing protein	-
J7T60_RS08550 (J7T60_08450)	-	1635025..1635192 (+)	168	WP_002945733.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
J7T60_RS08555	-	1635245..1635508 (+)	264	WP_022096902.1	hypothetical protein	-
J7T60_RS08560 (J7T60_08455)	tadA	1635588..1636106 (-)	519	WP_022096901.1	tRNA adenosine(34) deaminase TadA	-
J7T60_RS08565 (J7T60_08460)	ssbA	1636866..1637258 (-)	393	WP_372433443.1	single-stranded DNA-binding protein	Machinery gene
J7T60_RS08570 (J7T60_08465)	-	1637465..1637692 (-)	228	WP_064355726.1	sulfurtransferase TusA family protein	-
J7T60_RS08575 (J7T60_08470)	-	1637707..1638738 (-)	1032	WP_116920363.1	YeeE/YedE family protein	-
J7T60_RS08580 (J7T60_08475)	ytpR	1638872..1639495 (-)	624	WP_002952017.1	YtpR family tRNA-binding protein	-
J7T60_RS08585 (J7T60_08480)	-	1639505..1639819 (-)	315	WP_002945230.1	thioredoxin family protein	-
J7T60_RS08590 (J7T60_08485)	-	1639816..1640100 (-)	285	WP_179971067.1	DUF4651 domain-containing protein	-
J7T60_RS08595 (J7T60_08490)	pepA	1640200..1641267 (+)	1068	WP_372433444.1	glutamyl aminopeptidase	-
J7T60_RS08600 (J7T60_08495)	proC	1641283..1642053 (+)	771	WP_011226616.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14831.73 Da
• Isoelectric Point: 5.2795

>NTDB_id=553006 J7T60_RS08565 WP_372433443.1 1636866..1637258(-) (ssbA) [Streptococcus thermophilus strain S24735]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWDRLAETLASYASKGSLISLDGEIRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLILEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=553006 J7T60_RS08565 WP_372433443.1 1636866..1637258(-) (ssbA) [Streptococcus thermophilus strain S24735]
ATGTATAACAAAGTAATTTTAATTGGACGTTTGACAGCAACACCTGAAATGGTTAAGACTGCTAGTGACAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATCACAGTAGTGGTTT
GGGACCGTTTAGCTGAGACATTGGCATCTTATGCTAGCAAGGGAAGTTTAATTTCTCTTGATGGTGAGATTCGCACTCGT
AAGTATGATAAGGATGGTCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGACAATGACTTGGCTGACCTGATTTTAGAAGAAGAGCTTCCCTTTTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	78.626	100	0.792
ssbB	Streptococcus sobrinus strain NIDR 6715-7	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae TIGR4	74.046	100	0.746
ssbB/cilA	Streptococcus mitis SK321	73.282	100	0.738
ssbB/cilA	Streptococcus pneumoniae R6	73.282	100	0.738
ssbB/cilA	Streptococcus pneumoniae Rx1	73.282	100	0.738
ssbB/cilA	Streptococcus pneumoniae D39	73.282	100	0.738
ssbB/cilA	Streptococcus mitis NCTC 12261	71.756	100	0.723
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377