Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | SCAZ3_RS03030 | Genome accession | NZ_AIDX01000001 |
| Coordinates | 662705..663025 (-) | Length | 106 a.a. |
| NCBI ID | WP_003045326.1 | Uniprot ID | - |
| Organism | Streptococcus canis FSL Z3-227 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 657705..668025
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCAZ3_RS12380 (SCAZ3_10030) | - | 658329..659228 (-) | 900 | WP_003045323.1 | LPXTG cell wall anchor domain-containing protein | - |
| SCAZ3_RS03020 (SCAZ3_10035) | - | 659244..662072 (-) | 2829 | WP_003045324.1 | C39 family peptidase | - |
| SCAZ3_RS03025 (SCAZ3_10040) | - | 662093..662401 (-) | 309 | WP_003045325.1 | hypothetical protein | - |
| SCAZ3_RS03030 (SCAZ3_10045) | ssbB | 662705..663025 (-) | 321 | WP_003045326.1 | single-stranded DNA-binding protein | Machinery gene |
| SCAZ3_RS03035 (SCAZ3_10050) | - | 663037..664125 (-) | 1089 | WP_003045327.1 | replication initiator protein A | - |
| SCAZ3_RS03040 (SCAZ3_10055) | - | 664127..664312 (-) | 186 | WP_003045328.1 | hypothetical protein | - |
| SCAZ3_RS03045 (SCAZ3_10060) | - | 664337..664891 (-) | 555 | WP_003045329.1 | hypothetical protein | - |
| SCAZ3_RS03050 (SCAZ3_10065) | fusA | 665232..667310 (-) | 2079 | WP_003045330.1 | elongation factor G | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11951.66 Da Isoelectric Point: 9.5403
>NTDB_id=54316 SCAZ3_RS03030 WP_003045326.1 662705..663025(-) (ssbB) [Streptococcus canis FSL Z3-227]
MNNANLIGRLTRKPELYQTPDGKSYTRFTLAINRKKKSGGSADVADFIPCIIWGKSAENLCEWSDKGTLLSVEGDIRTRN
VEKDGVKFLAVEVWASYFQILNQPQK
MNNANLIGRLTRKPELYQTPDGKSYTRFTLAINRKKKSGGSADVADFIPCIIWGKSAENLCEWSDKGTLLSVEGDIRTRN
VEKDGVKFLAVEVWASYFQILNQPQK
Nucleotide
Download Length: 321 bp
>NTDB_id=54316 SCAZ3_RS03030 WP_003045326.1 662705..663025(-) (ssbB) [Streptococcus canis FSL Z3-227]
ATGAACAATGCTAATCTAATCGGTCGATTGACCAGAAAGCCAGAACTTTATCAAACCCCAGATGGGAAAAGCTATACAAG
GTTTACACTTGCTATCAATAGAAAGAAAAAGTCAGGAGGTTCTGCTGATGTCGCAGACTTTATCCCTTGTATTATTTGGG
GGAAATCAGCTGAAAACCTTTGCGAATGGAGTGATAAAGGGACATTACTAAGTGTTGAAGGCGATATTAGAACACGAAAT
GTCGAAAAAGATGGTGTGAAATTTCTTGCTGTTGAGGTTTGGGCAAGCTATTTCCAAATTTTGAATCAGCCTCAAAAGTA
A
ATGAACAATGCTAATCTAATCGGTCGATTGACCAGAAAGCCAGAACTTTATCAAACCCCAGATGGGAAAAGCTATACAAG
GTTTACACTTGCTATCAATAGAAAGAAAAAGTCAGGAGGTTCTGCTGATGTCGCAGACTTTATCCCTTGTATTATTTGGG
GGAAATCAGCTGAAAACCTTTGCGAATGGAGTGATAAAGGGACATTACTAAGTGTTGAAGGCGATATTAGAACACGAAAT
GTCGAAAAAGATGGTGTGAAATTTCTTGCTGTTGAGGTTTGGGCAAGCTATTTCCAAATTTTGAATCAGCCTCAAAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
48.039 |
96.226 |
0.462 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
47 |
94.34 |
0.443 |
| ssbA | Streptococcus mutans UA159 |
46 |
94.34 |
0.434 |
| ssbB/cilA | Streptococcus mitis SK321 |
44 |
94.34 |
0.415 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44 |
94.34 |
0.415 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44 |
94.34 |
0.415 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43 |
94.34 |
0.406 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43 |
94.34 |
0.406 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43 |
94.34 |
0.406 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
41.176 |
96.226 |
0.396 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
40.206 |
91.509 |
0.368 |