Detailed information NTG0532563

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JNO50_RS18190
• Genome accession: NZ_CP069161
• Coordinates: 3923478..3924356 (+)
• Length: 292 a.a.
• NCBI ID: WP_229804526.1
• Uniprot ID: A0A918P062
• Organism: Paludibacterium paludis strain BCRC 80514
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3918478..3929356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNO50_RS18165	rsmB	3918951..3920201 (-)	1251	WP_189532035.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
JNO50_RS18170	htpX	3920289..3921146 (-)	858	WP_189532033.1	zinc metalloprotease HtpX	-
JNO50_RS18175	fmt	3921182..3922102 (-)	921	WP_189532031.1	methionyl-tRNA formyltransferase	-
JNO50_RS18180	def	3922117..3922620 (-)	504	WP_189532030.1	peptide deformylase	-
JNO50_RS18185	-	3922720..3923481 (+)	762	WP_189532027.1	hypothetical protein	-
JNO50_RS18190	dprA	3923478..3924356 (+)	879	WP_229804526.1	DNA-processing protein DprA	Machinery gene
JNO50_RS18195	-	3924522..3924977 (+)	456	WP_189532026.1	DUF494 domain-containing protein	-
JNO50_RS18200	topA	3925120..3927408 (+)	2289	WP_189532024.1	type I DNA topoisomerase	-
JNO50_RS18205	-	3927693..3928043 (+)	351	WP_229804524.1	hypothetical protein	-
JNO50_RS18210	-	3928032..3928412 (-)	381	WP_189532020.1	diacylglycerol kinase	-

Sequence

Protein

• Length: 292 a.a.
• Molecular weight: 30607.70 Da
• Isoelectric Point: 6.3824

>NTDB_id=532563 JNO50_RS18190 WP_229804526.1 3923478..3924356(+) (dprA) [Paludibacterium paludis strain BCRC 80514]
MTPADHEAWLHLAFTRDLGASAALALVGRLGSARHALDASLSMLAPLIGHAAAEALHRRDAGGEVDAALEWAQQADCHLV
SLDDDDYPARLAETVGPPLVMFARGRRELLARPSLAIVGSRNASTEGAGTAQDFAAALAGHGYTIVSGLAEGIDTAAHRG
ALEHEASTIAVTGTGIDRVYPASNHALAREIAERGLVLSELPLGSKPLQHHFPRRNRVIAGMSQGCLVVEASVRSGSLIT
ARLALEAGREVMAIPGSIHNPQARGCHRLIKDGAKLVETVEDVMAEISPADR

Nucleotide

• Length: 879 bp

>NTDB_id=532563 JNO50_RS18190 WP_229804526.1 3923478..3924356(+) (dprA) [Paludibacterium paludis strain BCRC 80514]
GTGACGCCCGCCGATCACGAAGCCTGGCTGCATCTGGCCTTCACGCGCGACCTGGGCGCCTCGGCCGCGCTCGCCCTGGT
CGGCCGCCTCGGATCGGCCCGTCATGCCCTGGATGCGTCGCTGTCCATGCTCGCGCCGCTGATCGGCCATGCCGCGGCCG
AGGCCCTGCATCGCCGCGATGCGGGCGGCGAGGTGGACGCGGCGCTCGAATGGGCGCAGCAGGCGGATTGCCATCTGGTA
TCGCTTGACGACGACGATTATCCGGCCCGGCTCGCCGAAACGGTCGGCCCTCCTCTTGTCATGTTCGCCCGCGGACGGCG
CGAATTGCTCGCGCGCCCTTCCCTCGCGATAGTCGGCAGCCGCAATGCCTCCACCGAAGGGGCCGGAACCGCGCAGGACT
TCGCCGCCGCGCTCGCCGGTCACGGCTACACCATCGTCAGCGGACTTGCCGAGGGAATCGACACCGCCGCGCACCGCGGC
GCCCTGGAACACGAGGCCTCGACGATCGCCGTCACCGGCACGGGCATCGACCGCGTCTACCCGGCGAGCAATCACGCACT
GGCCCGCGAGATCGCGGAGCGGGGGCTCGTGCTGAGCGAGCTGCCTTTGGGCAGCAAACCTCTGCAGCATCATTTCCCCA
GACGCAACCGCGTCATCGCCGGCATGTCGCAAGGCTGCCTGGTGGTCGAGGCGAGCGTGCGCTCGGGATCGCTGATCACG
GCGCGGCTCGCGCTGGAAGCGGGACGGGAGGTGATGGCCATCCCCGGATCCATACACAATCCCCAGGCGCGCGGTTGCCA
CCGGCTCATCAAGGACGGCGCGAAACTCGTCGAAACCGTGGAGGATGTGATGGCGGAAATCTCCCCGGCGGACCGTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-278)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis MC58	53.608	99.658	0.534
dprA	Neisseria meningitidis strain C311	53.608	99.658	0.534
dprA	Neisseria gonorrhoeae MS11	52.921	99.658	0.527
dprA	Neisseria gonorrhoeae strain FA1090	52.577	99.658	0.524
dprA	Vibrio campbellii strain DS40M4	43.299	99.658	0.432
dprA	Vibrio cholerae strain A1552	40.203	100	0.408
dprA	Legionella pneumophila strain ERS1305867	52.889	77.055	0.408
dprA	Glaesserella parasuis strain SC1401	49.333	77.055	0.38
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	47.345	77.397	0.366
dprA/cilB/dalA	Streptococcus pneumoniae D39	47.345	77.397	0.366
dprA/cilB/dalA	Streptococcus pneumoniae R6	47.345	77.397	0.366
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	47.345	77.397	0.366
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	47.345	77.397	0.366
dprA/cilB/dalA	Streptococcus mitis SK321	47.345	77.397	0.366