Detailed information NTG0528642

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K8B93_RS23690
• Genome accession: NZ_CP082772
• Coordinates: 4904051..4905034 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli O2:H1 strain HM670
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4899051..4910034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B93_RS23670 (K8B93_23540)	-	4900683..4900790 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K8B93_RS23675 (K8B93_23545)	-	4901166..4901273 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
K8B93_RS23680 (K8B93_23550)	yhjV	4901749..4903020 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
K8B93_RS23685 (K8B93_23555)	dppF	4903050..4904054 (-)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K8B93_RS23690 (K8B93_23560)	amiE	4904051..4905034 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K8B93_RS23695 (K8B93_23565)	dppC	4905045..4905947 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K8B93_RS23700 (K8B93_23570)	dppB	4905957..4906976 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K8B93_RS23705 (K8B93_23575)	-	4906994..4907221 (+)	228	WP_000198577.1	hypothetical protein	-
K8B93_RS23710 (K8B93_23580)	dppA	4907283..4908890 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=528642 K8B93_RS23690 WP_001196477.1 4904051..4905034(-) (amiE) [Escherichia coli O2:H1 strain HM670]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=528642 K8B93_RS23690 WP_001196477.1 4904051..4905034(-) (amiE) [Escherichia coli O2:H1 strain HM670]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404