Detailed information NTG0526534

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JKG63_RS16660
• Genome accession: NZ_CP068049
• Coordinates: 3768983..3770164 (+)
• Length: 393 a.a.
• NCBI ID: WP_098181562.1
• Uniprot ID: -
• Organism: Burkholderia gladioli strain BBB-01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3763983..3775164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JKG63_RS16630	-	3764601..3765215 (+)	615	WP_013699419.1	50S ribosomal protein L25/general stress protein Ctc	-
JKG63_RS16635	pth	3765312..3765917 (+)	606	WP_025097010.1	aminoacyl-tRNA hydrolase	-
JKG63_RS16640	hisC	3766013..3767080 (+)	1068	WP_186052517.1	histidinol-phosphate transaminase	-
JKG63_RS16645	-	3767227..3767499 (-)	273	WP_013699422.1	YfhL family 4Fe-4S dicluster ferredoxin	-
JKG63_RS16650	coaD	3767566..3768066 (-)	501	WP_013699423.1	pantetheine-phosphate adenylyltransferase	-
JKG63_RS16655	rsmD	3768178..3768792 (-)	615	WP_036036218.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
JKG63_RS16660	pilA	3768983..3770164 (+)	1182	WP_098181562.1	signal recognition particle-docking protein FtsY	Machinery gene
JKG63_RS16665	maiA	3770237..3770881 (-)	645	WP_017918780.1	maleylacetoacetate isomerase	-
JKG63_RS16670	ybiB	3771095..3772075 (+)	981	WP_105828180.1	DNA-binding protein YbiB	-
JKG63_RS16675	leuA	3772575..3774227 (+)	1653	WP_046579737.1	2-isopropylmalate synthase	-
JKG63_RS16680	-	3774410..3774796 (-)	387	WP_013699429.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 41410.47 Da
• Isoelectric Point: 4.8819

>NTDB_id=526534 JKG63_RS16660 WP_098181562.1 3768983..3770164(+) (pilA) [Burkholderia gladioli strain BBB-01]
MFSFFKRLIGSKADGAPTDDQDAPTDRQDDAEAPAAEAPRPVERVAAPTPAPAVPVEPAAPAQVAPALPAAAHEDEAQAV
TAVEIVPPPAPEPAAKKSWIARLRSGLSKTSSSLTSVFVSTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVKAER
LTDPQQVKAALRGLLIALLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQL
AIWGERNNVTVVQQESGDPAAVIFDAVGAARARKINVVMADTAGRLPTQLHLMEELRKVKRVIGKAQADAPHEVLLVIDA
NTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAEEFTDALLG

Nucleotide

• Length: 1182 bp

>NTDB_id=526534 JKG63_RS16660 WP_098181562.1 3768983..3770164(+) (pilA) [Burkholderia gladioli strain BBB-01]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGGCGCGCCGACCGACGACCAGGACGCGCCGACGGACCG
GCAGGACGACGCCGAGGCGCCCGCGGCCGAAGCGCCCCGGCCCGTCGAGCGGGTCGCCGCGCCGACGCCGGCGCCGGCGG
TTCCGGTCGAGCCGGCCGCGCCCGCGCAAGTCGCCCCTGCTCTCCCCGCCGCCGCGCACGAAGACGAAGCGCAGGCCGTC
ACGGCCGTCGAGATCGTGCCGCCGCCCGCGCCGGAGCCGGCCGCCAAGAAATCCTGGATCGCGCGCCTGCGCTCGGGCCT
GTCGAAGACCAGTTCGAGCCTGACCAGCGTGTTCGTCAGCACCAAGATCGACGAGGATCTCTACGAGGAGCTCGAGACCG
CGCTGCTGATGTCCGACGCCGGCGTCGACGCCACCGAGTACCTACTCGGCGCGCTGCGCGAGAAGGTCAAGGCCGAGCGG
CTGACCGATCCGCAGCAGGTCAAGGCGGCCCTGCGCGGCCTGCTGATCGCGCTGCTCGCGCCGCTCGAGAAGTCGCTGAT
GCTGGGCCGCGCGCAGCCGCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGG
CCAAGCACCTGCAGAGCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTC
GCGATCTGGGGCGAGCGCAACAACGTGACGGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGT
GGGCGCCGCGCGCGCGCGCAAGATCAACGTGGTGATGGCCGATACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGG
AGGAGCTGCGCAAGGTCAAGCGCGTGATCGGCAAGGCACAGGCCGACGCGCCGCACGAGGTGCTGCTGGTGATCGACGCC
AACACCGGCCAGAACGCGCTCGCCCAGGTAAAGGCCTTCGACGACGCGCTGGGCCTCACCGGCCTGATTGTCACCAAGCT
CGACGGCACCGCGAAGGGCGGCATCCTCGCCGCGATCGCGCGGCAGCGGCCGGTACCGGTCTACTTCATCGGCGTCGGCG
AGAAGGTGGAGGACCTGCAGCCCTTCAATGCCGAGGAGTTCACCGACGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (194-392)

• SRP54-type protein, helical bundle domain (SRP54_N) (112-172)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.306	100	0.55