Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   I6J18_RS06245 Genome accession   NZ_CP068053
Coordinates   1141291..1142535 (-) Length   414 a.a.
NCBI ID   WP_040376536.1    Uniprot ID   A0A974NNX6
Organism   Peribacillus psychrosaccharolyticus strain FDAARGOS_1161     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1136291..1147535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J18_RS06225 (I6J18_06220) - 1136515..1136775 (-) 261 WP_040376540.1 stage V sporulation protein S -
  I6J18_RS06230 (I6J18_06225) - 1136973..1137770 (-) 798 WP_040376539.1 TIGR00282 family metallophosphoesterase -
  I6J18_RS06235 (I6J18_06230) rny 1137866..1139428 (-) 1563 WP_040376538.1 ribonuclease Y -
  I6J18_RS06240 (I6J18_06235) recA 1139748..1140794 (-) 1047 WP_040376537.1 recombinase RecA Machinery gene
  I6J18_RS06245 (I6J18_06240) cinA 1141291..1142535 (-) 1245 WP_040376536.1 competence/damage-inducible protein A Machinery gene
  I6J18_RS06250 (I6J18_06245) pgsA 1142556..1143140 (-) 585 WP_040374100.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  I6J18_RS06255 (I6J18_06250) - 1143205..1144107 (-) 903 WP_040374101.1 RodZ domain-containing protein -
  I6J18_RS06260 (I6J18_06255) - 1144125..1144916 (-) 792 WP_040374102.1 DUF3388 domain-containing protein -
  I6J18_RS06265 (I6J18_06260) - 1145207..1145464 (-) 258 WP_040374103.1 DUF3243 domain-containing protein -
  I6J18_RS06270 (I6J18_06265) ymfI 1145543..1146265 (-) 723 WP_201647986.1 elongation factor P 5-aminopentanone reductase -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45463.16 Da        Isoelectric Point: 5.3727

>NTDB_id=526541 I6J18_RS06245 WP_040376536.1 1141291..1142535(-) (cinA) [Peribacillus psychrosaccharolyticus strain FDAARGOS_1161]
MDAEIIAVGSELLLGQIVNTNGRFLSQQFAEMGINVYYHTVVGDNDKRLQDAVDIAKKRADLIVFTGGLGPTKDDMTKET
ISRMLGKELVFDQEALQSIEAYFTKSNRVMTENNKKQALVLEGSDILANDHGMAPGMVLTVENITYMLLPGPPSEMEPMF
LKYGYQTLMKMMDKHERIESKVLRFFGIGEAKLETVIEDLIEKQSNPTIAPLAGDGEVTLRITAKHETKEKCEEMIAAAE
KEILSRVGQFHYGNNQTSLIKELVKELTVRKLTIAGAESLTGGMFQEQLTTIPGAGKVFKGGIVSYTNDAKSNVLNVKNK
TIEQFGVVSEECAIEMAENVSTQFDADIGISFTGVAGPDTQEGKPVGTIFIGIAFRNGKSLAKKLSLSGSRSQNRVRSVK
YGCHFLLQEVNNLS

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=526541 I6J18_RS06245 WP_040376536.1 1141291..1142535(-) (cinA) [Peribacillus psychrosaccharolyticus strain FDAARGOS_1161]
ATGGATGCAGAAATTATTGCGGTTGGATCAGAACTGCTTTTAGGGCAGATTGTAAATACAAATGGCCGTTTTTTATCACA
GCAATTTGCAGAAATGGGTATTAACGTTTATTATCATACGGTCGTAGGGGATAATGACAAGAGACTGCAGGATGCAGTCG
ATATTGCCAAGAAACGTGCTGACTTAATTGTTTTCACCGGCGGTTTAGGACCTACGAAGGATGATATGACGAAAGAAACC
ATTTCAAGAATGCTGGGTAAAGAACTTGTTTTTGATCAAGAGGCCCTTCAATCCATTGAAGCCTATTTCACTAAATCAAA
CCGAGTCATGACTGAAAATAATAAAAAACAAGCACTTGTACTTGAGGGATCTGACATATTAGCAAATGATCATGGCATGG
CACCCGGTATGGTCCTGACGGTCGAGAATATTACTTATATGCTCCTGCCTGGTCCTCCAAGTGAGATGGAACCAATGTTT
TTGAAATATGGCTATCAAACGCTTATGAAAATGATGGATAAGCATGAACGAATTGAATCTAAAGTTCTGCGCTTTTTTGG
GATTGGTGAAGCTAAGTTAGAAACGGTAATTGAAGACTTAATTGAAAAACAGTCCAACCCGACAATCGCACCGCTTGCAG
GCGATGGCGAAGTAACACTTAGGATAACAGCAAAGCATGAAACAAAAGAAAAGTGCGAAGAGATGATTGCTGCAGCTGAA
AAAGAAATTTTAAGCAGAGTCGGGCAATTTCATTATGGAAATAACCAAACGTCACTTATTAAGGAATTAGTAAAGGAACT
TACTGTTCGCAAGCTGACCATAGCGGGAGCTGAAAGCCTGACTGGCGGGATGTTTCAAGAACAGCTGACAACAATCCCAG
GTGCAGGCAAAGTCTTTAAAGGCGGTATTGTCAGTTATACAAATGATGCGAAATCAAATGTGCTCAATGTCAAAAACAAG
ACAATTGAACAATTTGGCGTCGTCAGTGAAGAATGTGCGATTGAAATGGCTGAAAACGTCAGTACTCAGTTTGATGCTGA
TATAGGTATCAGCTTCACCGGCGTTGCTGGACCAGATACTCAAGAAGGAAAACCTGTGGGTACAATATTCATTGGAATTG
CCTTTCGTAATGGAAAATCACTGGCTAAAAAGCTGAGTCTTTCGGGCAGTCGATCTCAAAATCGTGTTCGCAGTGTGAAA
TACGGTTGTCATTTTTTACTGCAGGAAGTAAACAACCTATCATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-166)

Competence-damaged protein (CinA)

(257-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

57.635

98.068

0.565
  cinA Streptococcus pneumoniae TIGR4

46.324

98.551

0.457
  cinA Streptococcus mitis SK321

45.833

98.551

0.452
  cinA Streptococcus mitis NCTC 12261

45.833

98.551

0.452
  cinA Streptococcus pneumoniae Rx1

45.588

98.551

0.449
  cinA Streptococcus pneumoniae R6

45.588

98.551

0.449
  cinA Streptococcus pneumoniae D39

45.343

98.551

0.447
  cinA Streptococcus mutans UA159

44.169

97.343

0.43
  cinA Streptococcus suis isolate S10

37.688

96.135

0.362