Detailed information NTG0519164

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: IGS65_RS08805
• Genome accession: NZ_CP066294
• Coordinates: 1812425..1812820 (+)
• Length: 131 a.a.
• NCBI ID: WP_002263999.1
• Uniprot ID: A0AAX1K1Y7
• Organism: Streptococcus mutans strain 27-3
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1807425..1817820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGS65_RS08765 (IGS65_008765)	-	1807522..1808184 (+)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-
IGS65_RS08770 (IGS65_008770)	proC	1808271..1809041 (-)	771	WP_002263447.1	pyrroline-5-carboxylate reductase	-
IGS65_RS08775 (IGS65_008775)	pepA	1809097..1810164 (-)	1068	WP_002272112.1	glutamyl aminopeptidase	-
IGS65_RS08780 (IGS65_008780)	-	1810224..1810532 (+)	309	WP_002263449.1	DUF4651 domain-containing protein	-
IGS65_RS08785 (IGS65_008785)	-	1810510..1810839 (+)	330	WP_168745771.1	thioredoxin family protein	-
IGS65_RS08790 (IGS65_008790)	ytpR	1810836..1811462 (+)	627	WP_192072410.1	YtpR family tRNA-binding protein	-
IGS65_RS08795 (IGS65_008795)	-	1811560..1811982 (+)	423	WP_002267583.1	MarR family transcriptional regulator	-
IGS65_RS08800 (IGS65_008800)	-	1811982..1812338 (+)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
IGS65_RS08805 (IGS65_008805)	ssbA	1812425..1812820 (+)	396	WP_002263999.1	single-stranded DNA-binding protein	Machinery gene
IGS65_RS08810 (IGS65_008810)	-	1813239..1814201 (+)	963	WP_002274167.1	sugar ABC transporter substrate-binding protein	-
IGS65_RS08815 (IGS65_008815)	-	1814201..1815523 (+)	1323	WP_002263456.1	sensor histidine kinase	-
IGS65_RS08820 (IGS65_008820)	-	1815523..1816203 (+)	681	WP_002263457.1	response regulator transcription factor	-
IGS65_RS08825 (IGS65_008825)	-	1816196..1817503 (+)	1308	WP_002267844.1	extracellular solute-binding protein	-
IGS65_RS08830 (IGS65_008830)	-	1817569..1817772 (+)	204	Protein_1708	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14869.91 Da
• Isoelectric Point: 6.4856

>NTDB_id=519164 IGS65_RS08805 WP_002263999.1 1812425..1812820(+) (ssbA) [Streptococcus mutans strain 27-3]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=519164 IGS65_RS08805 WP_002263999.1 1812425..1812820(+) (ssbA) [Streptococcus mutans strain 27-3]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAGACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGCAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	99.237	100	0.992
ssbB	Streptococcus sobrinus strain NIDR 6715-7	79.389	100	0.794
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.763
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.756
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.756
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.74
ssbB	Lactococcus lactis subsp. cremoris KW2	58.929	85.496	0.504
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	42.478	86.26	0.366