Detailed information NTG0517333

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: I6I02_RS00225
• Genome accession: NZ_CP066093
• Coordinates: 46635..47027 (+)
• Length: 130 a.a.
• NCBI ID: WP_037601494.1
• Uniprot ID: A0A074JHY3
• Organism: Streptococcus salivarius strain FDAARGOS_1045
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 41635..52027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I02_RS00190 (I6I02_00190)	pepA	42050..43117 (-)	1068	WP_013991256.1	glutamyl aminopeptidase	-
I6I02_RS00195 (I6I02_00195)	-	43217..43501 (+)	285	WP_013991255.1	DUF4651 domain-containing protein	-
I6I02_RS00200 (I6I02_00200)	-	43498..43812 (+)	315	WP_013991254.1	thioredoxin family protein	-
I6I02_RS00205 (I6I02_00205)	-	43816..44340 (+)	525	WP_013991253.1	hypothetical protein	-
I6I02_RS00210 (I6I02_00210)	ytpR	44372..44995 (+)	624	WP_013991252.1	YtpR family tRNA-binding protein	-
I6I02_RS00215 (I6I02_00215)	-	45133..46164 (+)	1032	WP_037601491.1	YeeE/YedE family protein	-
I6I02_RS00220 (I6I02_00220)	-	46179..46406 (+)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
I6I02_RS00225 (I6I02_00225)	ssbA	46635..47027 (+)	393	WP_037601494.1	single-stranded DNA-binding protein	Machinery gene
I6I02_RS00230 (I6I02_00230)	tadA	47797..48315 (+)	519	WP_014635105.1	tRNA adenosine(34) deaminase TadA	-
I6I02_RS00235 (I6I02_00235)	-	48402..48653 (-)	252	WP_014635104.1	hypothetical protein	-
I6I02_RS00240 (I6I02_00240)	-	48701..48868 (-)	168	WP_002892002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
I6I02_RS00245 (I6I02_00245)	-	48889..49047 (-)	159	WP_002892000.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
I6I02_RS00255 (I6I02_00255)	-	49468..50301 (+)	834	WP_198463595.1	methyltransferase domain-containing protein	-
I6I02_RS00260 (I6I02_00260)	-	50421..51173 (+)	753	WP_198463960.1	HAD family hydrolase	-
I6I02_RS00265 (I6I02_00265)	dapD	51259..51957 (+)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14787.72 Da
• Isoelectric Point: 5.9275

>NTDB_id=517333 I6I02_RS00225 WP_037601494.1 46635..47027(+) (ssbA) [Streptococcus salivarius strain FDAARGOS_1045]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLVSYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=517333 I6I02_RS00225 WP_037601494.1 46635..47027(+) (ssbA) [Streptococcus salivarius strain FDAARGOS_1045]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACAGCGACTCCTGAAATGGTAAAAACTGCTAGTGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGTATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A074JHY3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.808
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.777
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.738
ssbB	Lactococcus lactis subsp. cremoris KW2	62.5	86.154	0.538
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377