Detailed information NTG0516958

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: I6H78_RS04470
• Genome accession: NZ_CP066059
• Coordinates: 930901..931362 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250706.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_1021
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 925901..936362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H78_RS04440 (I6H78_04440)	-	926311..927138 (-)	828	WP_162837252.1	membrane protein insertase YidC	-
I6H78_RS04445 (I6H78_04445)	rnpA	927113..927484 (-)	372	WP_000748120.1	ribonuclease P protein component	-
I6H78_RS04450 (I6H78_04450)	-	927634..928824 (-)	1191	WP_198460190.1	acetate kinase	-
I6H78_RS04455 (I6H78_04455)	comYH	928875..929828 (-)	954	WP_198460191.1	class I SAM-dependent methyltransferase	Machinery gene
I6H78_RS04460 (I6H78_04460)	-	929887..930477 (-)	591	WP_198460192.1	class I SAM-dependent methyltransferase	-
I6H78_RS04465 (I6H78_04465)	comGG/cglG	930510..930923 (-)	414	WP_000265643.1	competence type IV pilus minor pilin ComGG	Machinery gene
I6H78_RS04470 (I6H78_04470)	comGF/cglF	930901..931362 (-)	462	WP_000250706.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6H78_RS04475 (I6H78_04475)	comGE/cglE	931325..931627 (-)	303	WP_000413374.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6H78_RS04480 (I6H78_04480)	comGD/cglD	931590..932024 (-)	435	WP_198460193.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6H78_RS04485 (I6H78_04485)	comGC/cglC	931987..932310 (-)	324	WP_000735798.1	competence type IV pilus major pilin ComGC	Machinery gene
I6H78_RS04490 (I6H78_04490)	comGB/cglB	932312..933328 (-)	1017	WP_198460227.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6H78_RS04495 (I6H78_04495)	comGA/cglA/cilD	933276..934217 (-)	942	WP_198460194.1	competence type IV pilus ATPase ComGA	Machinery gene
I6H78_RS04500 (I6H78_04500)	-	934280..934645 (-)	366	WP_000286396.1	DUF1033 family protein	-
I6H78_RS04505 (I6H78_04505)	nagA	934798..935949 (-)	1152	WP_198460195.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17782.41 Da
• Isoelectric Point: 8.8121

>NTDB_id=516958 I6H78_RS04470 WP_000250706.1 930901..931362(-) (comGF/cglF) [Streptococcus oralis strain FDAARGOS_1021]
MVQRSCSTLKSHKVKAFTLLESLIALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELERSQFDKVEGN
RLYMKQDGKDVSIGKSKSDDFRKTDTSGRGYQPMVYGLESAQIIEENQLVRFRFQFQKGLEREFIYRVEKAKS

Nucleotide

• Length: 462 bp

>NTDB_id=516958 I6H78_RS04470 WP_000250706.1 930901..931362(-) (comGF/cglF) [Streptococcus oralis strain FDAARGOS_1021]
ATGGTTCAGAGAAGTTGCTCGACCTTAAAGAGCCATAAGGTCAAAGCTTTTACCCTGTTAGAATCCCTGATTGCCCTTAT
CGTCATTAGCGGGGGCTTGCTCCTCTTTCAGGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGCAGCAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTGGAGGCAGAGTTAGAGCGTTCACAGTTTGACAAGGTAGAAGGCAAT
CGCCTCTACATGAAACAGGATGGTAAGGATGTCTCTATAGGAAAGTCTAAATCGGATGATTTTCGAAAAACGGATACTAG
CGGACGGGGCTACCAACCCATGGTTTATGGACTCGAATCAGCACAGATTATAGAGGAAAATCAATTGGTTCGCTTTCGCT
TCCAATTTCAAAAGGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGCAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis SK321	90.196	100	0.902
comGF/cglF	Streptococcus mitis NCTC 12261	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae Rx1	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae D39	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae R6	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae TIGR4	86.928	100	0.869
comGF	Lactococcus lactis subsp. cremoris KW2	40	91.503	0.366