Detailed information NTG0516127

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: I6H76_RS05025
• Genome accession: NZ_CP065994
• Coordinates: 1001726..1002121 (-)
• Length: 131 a.a.
• NCBI ID: WP_006531731.1
• Uniprot ID: -
• Organism: Streptococcus infantarius strain FDAARGOS_1019
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 996726..1007121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H76_RS04995 (I6H76_04995)	-	996759..998057 (+)	1299	WP_006531724.1	polysaccharide deacetylase family protein	-
I6H76_RS05000 (I6H76_05000)	-	998176..998253 (-)	78	Protein_984	IS6 family transposase	-
I6H76_RS05005 (I6H76_05005)	-	998328..999187 (-)	860	Protein_985	substrate-binding domain-containing protein	-
I6H76_RS05010 (I6H76_05010)	-	999368..1000174 (-)	807	WP_006531728.1	Cof-type HAD-IIB family hydrolase	-
I6H76_RS05015 (I6H76_05015)	-	1000303..1000530 (-)	228	WP_006531729.1	sulfurtransferase TusA family protein	-
I6H76_RS05020 (I6H76_05020)	-	1000533..1001576 (-)	1044	WP_006531730.1	YeeE/YedE family protein	-
I6H76_RS05025 (I6H76_05025)	ssbA	1001726..1002121 (-)	396	WP_006531731.1	single-stranded DNA-binding protein	Machinery gene
I6H76_RS05030 (I6H76_05030)	-	1002232..1002948 (+)	717	WP_006531732.1	class I SAM-dependent methyltransferase	-
I6H76_RS05035 (I6H76_05035)	ytpR	1002985..1003611 (-)	627	WP_006531733.1	YtpR family tRNA-binding protein	-
I6H76_RS05040 (I6H76_05040)	-	1003620..1003937 (-)	318	WP_006531734.1	thioredoxin family protein	-
I6H76_RS05045 (I6H76_05045)	-	1003930..1004223 (-)	294	WP_043878321.1	DUF4651 domain-containing protein	-
I6H76_RS05050 (I6H76_05050)	pepA	1004341..1005408 (+)	1068	WP_006531736.1	glutamyl aminopeptidase	-
I6H76_RS05055 (I6H76_05055)	proC	1005470..1006240 (+)	771	WP_006531737.1	pyrroline-5-carboxylate reductase	-
I6H76_RS05060 (I6H76_05060)	-	1006275..1006910 (-)	636	WP_014334210.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14902.96 Da
• Isoelectric Point: 5.7916

>NTDB_id=516127 I6H76_RS05025 WP_006531731.1 1001726..1002121(-) (ssbA) [Streptococcus infantarius strain FDAARGOS_1019]
MYNKVIMIGRLTVQPELVTTPTEKSVTRVTLAVNRRFKSQNGEREADFISLVVWGRLAETLVSYAGKGSLISVDGELRTR
KYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=516127 I6H76_RS05025 WP_006531731.1 1001726..1002121(-) (ssbA) [Streptococcus infantarius strain FDAARGOS_1019]
ATGTATAATAAAGTTATTATGATTGGGCGTTTGACAGTGCAGCCTGAATTGGTGACAACGCCAACCGAAAAATCTGTTAC
ACGTGTAACACTAGCCGTTAACCGTCGTTTTAAATCACAAAATGGTGAGCGTGAAGCGGATTTTATTTCGCTTGTGGTTT
GGGGGCGTTTAGCAGAAACGCTCGTTTCTTATGCTGGAAAAGGGAGTTTGATTTCTGTTGATGGAGAGCTTCGTACGCGT
AAATACGAAAAAGATGGTCACACCAATTATGTGACAGAAGTGCTCTGCCATTCTTTCCAACTTTTAGAAAGCCGTGCCCA
ACGTGCCATGCGAGAAAATAATGTGGCAAACGACCTCGCTGACTTAGTTTTAGAAGAGGAAGAATTGCCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.802
ssbB/cilA	Streptococcus pneumoniae R6	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae Rx1	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae D39	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae TIGR4	77.099	100	0.771
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.763
ssbB/cilA	Streptococcus mitis NCTC 12261	76.336	100	0.763
ssbB/cilA	Streptococcus mitis SK321	76.336	100	0.763
ssbB	Lactococcus lactis subsp. cremoris KW2	62.281	87.023	0.542
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	45.299	89.313	0.405