Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KU508_RS00015 Genome accession   NZ_CP077854
Coordinates   783..1601 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain N4     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1..6601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU508_RS00010 (KU508_00010) - 491..805 (-) 315 WP_000435806.1 YfhH family protein -
  KU508_RS00015 (KU508_00015) recX 783..1601 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  KU508_RS00020 (KU508_00020) sgtB 1861..2670 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  KU508_RS00025 (KU508_00025) - 3010..3525 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  KU508_RS00030 (KU508_00030) - 3656..3817 (-) 162 WP_001005407.1 SE1561 family protein -
  KU508_RS00035 (KU508_00035) yfkAB 4041..5192 (+) 1152 WP_001089621.1 radical SAM/CxCxxxxC motif protein YfkAB -
  KU508_RS00040 (KU508_00040) - 5452..5982 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=508202 KU508_RS00015 WP_001124422.1 783..1601(-) (recX) [Staphylococcus aureus strain N4]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=508202 KU508_RS00015 WP_001124422.1 783..1601(-) (recX) [Staphylococcus aureus strain N4]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATTCAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996