Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SMULJ23_RS01165 | Genome accession | NC_017768 |
| Coordinates | 262015..262410 (+) | Length | 131 a.a. |
| NCBI ID | WP_002263999.1 | Uniprot ID | A0AAX1K1Y7 |
| Organism | Streptococcus mutans LJ23 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 257015..267410
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMULJ23_RS01125 (SMULJ23_0206) | - | 257114..257776 (+) | 663 | WP_002263446.1 | type II CAAX endopeptidase family protein | - |
| SMULJ23_RS01130 (SMULJ23_0207) | proC | 257861..258631 (-) | 771 | WP_002263447.1 | pyrroline-5-carboxylate reductase | - |
| SMULJ23_RS01135 (SMULJ23_0208) | pepA | 258687..259754 (-) | 1068 | WP_014677741.1 | glutamyl aminopeptidase | - |
| SMULJ23_RS01140 (SMULJ23_0209) | - | 259814..260122 (+) | 309 | WP_002263449.1 | DUF4651 domain-containing protein | - |
| SMULJ23_RS01145 (SMULJ23_0210) | - | 260100..260429 (+) | 330 | WP_014677742.1 | thioredoxin family protein | - |
| SMULJ23_RS01150 (SMULJ23_0211) | ytpR | 260426..261052 (+) | 627 | WP_014677743.1 | YtpR family tRNA-binding protein | - |
| SMULJ23_RS01155 (SMULJ23_0212) | - | 261150..261572 (+) | 423 | WP_014677744.1 | MarR family transcriptional regulator | - |
| SMULJ23_RS01160 (SMULJ23_0213) | - | 261572..261928 (+) | 357 | WP_002276035.1 | rhodanese-like domain-containing protein | - |
| SMULJ23_RS01165 (SMULJ23_0214) | ssbA | 262015..262410 (+) | 396 | WP_002263999.1 | single-stranded DNA-binding protein | Machinery gene |
| SMULJ23_RS01170 (SMULJ23_0215) | - | 262826..263788 (+) | 963 | WP_002263455.1 | sugar ABC transporter substrate-binding protein | - |
| SMULJ23_RS01175 (SMULJ23_0216) | - | 263788..265110 (+) | 1323 | WP_002263456.1 | sensor histidine kinase | - |
| SMULJ23_RS01180 (SMULJ23_0217) | - | 265110..265790 (+) | 681 | WP_002263457.1 | response regulator transcription factor | - |
| SMULJ23_RS01185 (SMULJ23_0218) | - | 265783..267090 (+) | 1308 | WP_002267844.1 | extracellular solute-binding protein | - |
| SMULJ23_RS09970 | - | 267156..267359 (+) | 204 | Protein_214 | hypothetical protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14869.91 Da Isoelectric Point: 6.4856
>NTDB_id=50738 SMULJ23_RS01165 WP_002263999.1 262015..262410(+) (ssbA) [Streptococcus mutans LJ23]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=50738 SMULJ23_RS01165 WP_002263999.1 262015..262410(+) (ssbA) [Streptococcus mutans LJ23]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
99.237 |
100 |
0.992 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
79.389 |
100 |
0.794 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus mitis SK321 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
74.046 |
100 |
0.74 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
58.929 |
85.496 |
0.504 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
42.478 |
86.26 |
0.366 |