Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | IUJ54_RS01940 | Genome accession | NZ_CP064378 |
| Coordinates | 461842..462255 (+) | Length | 137 a.a. |
| NCBI ID | WP_015444381.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 456842..467255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ54_RS01920 (IUJ54_01925) | - | 457558..458988 (+) | 1431 | WP_010947635.1 | cellulase family glycosylhydrolase | - |
| IUJ54_RS01925 (IUJ54_01930) | - | 459119..460540 (-) | 1422 | WP_010947634.1 | APC family permease | - |
| IUJ54_RS01930 (IUJ54_01935) | - | 460615..460932 (-) | 318 | WP_010947633.1 | BolA/IbaG family iron-sulfur metabolism protein | - |
| IUJ54_RS01935 (IUJ54_01940) | pilA2 | 461235..461645 (+) | 411 | WP_016356941.1 | pilin | Machinery gene |
| IUJ54_RS01940 (IUJ54_01945) | pilA2 | 461842..462255 (+) | 414 | WP_015444381.1 | pilin | Machinery gene |
| IUJ54_RS01945 (IUJ54_01950) | - | 462252..463496 (-) | 1245 | WP_010947630.1 | 6-phosphofructokinase | - |
| IUJ54_RS01950 (IUJ54_01955) | letS | 463593..466325 (-) | 2733 | WP_010947629.1 | hybrid sensor histidine kinase/response regulator | Regulator |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14505.91 Da Isoelectric Point: 6.2016
>NTDB_id=501383 IUJ54_RS01940 WP_015444381.1 461842..462255(+) (pilA2) [Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376]
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=501383 IUJ54_RS01940 WP_015444381.1 461842..462255(+) (pilA2) [Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376]
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.732 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
45.89 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.601 |
100 |
0.409 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.143 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |