Detailed information NTG0049492

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SALIVA_RS09355
• Genome accession: NC_017595
• Coordinates: 2051529..2051921 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius JIM8777
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2046529..2056921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVA_RS09320 (SALIVA_1907)	dapD	2046599..2047297 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
SALIVA_RS09325 (SALIVA_1908)	-	2047383..2048135 (-)	753	WP_014635101.1	HAD family hydrolase	-
SALIVA_RS09330 (SALIVA_1909)	-	2048249..2049088 (-)	840	WP_014635102.1	methyltransferase domain-containing protein	-
SALIVA_RS09335 (SALIVA_1910)	-	2049510..2049668 (+)	159	WP_014635103.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
SALIVA_RS09340 (SALIVA_1911)	-	2049688..2049855 (+)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
SALIVA_RS09345 (SALIVA_1912)	-	2049903..2050154 (+)	252	WP_014635104.1	hypothetical protein	-
SALIVA_RS09350 (SALIVA_1913)	tadA	2050241..2050759 (-)	519	WP_014635105.1	tRNA adenosine(34) deaminase TadA	-
SALIVA_RS09355 (SALIVA_1914)	ssbA	2051529..2051921 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
SALIVA_RS09360 (SALIVA_1915)	ytpR	2052011..2052634 (-)	624	WP_014635106.1	YtpR family tRNA-binding protein	-
SALIVA_RS09365 (SALIVA_1916)	-	2052667..2053191 (-)	525	WP_014635107.1	hypothetical protein	-
SALIVA_RS09370 (SALIVA_1917)	-	2053195..2053509 (-)	315	WP_014635108.1	thioredoxin family protein	-
SALIVA_RS09375 (SALIVA_1918)	-	2053506..2053790 (-)	285	WP_014635109.1	DUF4651 domain-containing protein	-
SALIVA_RS09380 (SALIVA_1919)	pepA	2053890..2054957 (+)	1068	WP_014635110.1	glutamyl aminopeptidase	-
SALIVA_RS09385 (SALIVA_1920)	proC	2054973..2055743 (+)	771	WP_013991257.1	pyrroline-5-carboxylate reductase	-
SALIVA_RS09390 (SALIVA_1921)	-	2055770..2056432 (-)	663	WP_014635111.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=49492 SALIVA_RS09355 WP_002885697.1 2051529..2051921(-) (ssbA) [Streptococcus salivarius JIM8777]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=49492 SALIVA_RS09355 WP_002885697.1 2051529..2051921(-) (ssbA) [Streptococcus salivarius JIM8777]
ATGTATAACAAAGTAATTTTAATTGGACGTTTGACAGCTACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCCTCTTATGCAAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACCCATTACGTTACTGAGGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGACAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385