Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BJAB07104_RS08585 | Genome accession | NC_021726 |
| Coordinates | 1749507..1750613 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187342.1 | Uniprot ID | A0ABX6CGL8 |
| Organism | Acinetobacter baumannii BJAB07104 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1744507..1755613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJAB07104_RS08550 (BJAB07104_01689) | grxD | 1744852..1745193 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| BJAB07104_RS08555 (BJAB07104_01690) | - | 1745421..1746629 (+) | 1209 | WP_000129953.1 | aspartate aminotransferase family protein | - |
| BJAB07104_RS08560 (BJAB07104_01691) | - | 1746680..1747111 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| BJAB07104_RS08565 (BJAB07104_01692) | - | 1747252..1747626 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| BJAB07104_RS08570 (BJAB07104_01694) | - | 1748164..1748397 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| BJAB07104_RS08575 (BJAB07104_01695) | - | 1748613..1748972 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| BJAB07104_RS08580 (BJAB07104_01696) | - | 1749073..1749399 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| BJAB07104_RS08585 (BJAB07104_01697) | pilA | 1749507..1750613 (+) | 1107 | WP_001187342.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| BJAB07104_RS08590 (BJAB07104_01698) | - | 1750803..1751399 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| BJAB07104_RS08595 (BJAB07104_01699) | - | 1751625..1752296 (+) | 672 | WP_000175350.1 | DUF2057 domain-containing protein | - |
| BJAB07104_RS08600 (BJAB07104_01700) | - | 1752369..1752893 (+) | 525 | WP_000593801.1 | GNAT family N-acetyltransferase | - |
| BJAB07104_RS08605 (BJAB07104_01701) | - | 1752906..1753205 (-) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| BJAB07104_RS08610 | cydX | 1753206..1753307 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| BJAB07104_RS08615 (BJAB07104_01702) | cydB | 1753321..1754466 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39919.72 Da Isoelectric Point: 4.9872
>NTDB_id=49437 BJAB07104_RS08585 WP_001187342.1 1749507..1750613(+) (pilA) [Acinetobacter baumannii BJAB07104]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=49437 BJAB07104_RS08585 WP_001187342.1 1749507..1750613(+) (pilA) [Acinetobacter baumannii BJAB07104]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |