Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SSAL_RS00820 | Genome accession | NC_017594 |
| Coordinates | 149000..149392 (+) | Length | 130 a.a. |
| NCBI ID | WP_014632554.1 | Uniprot ID | A0AB37DE84 |
| Organism | Streptococcus salivarius 57.I | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 144000..154392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSAL_RS00790 (Ssal_00156) | pepA | 144684..145751 (-) | 1068 | WP_014632550.1 | glutamyl aminopeptidase | - |
| SSAL_RS00795 (Ssal_00157) | - | 145851..146135 (+) | 285 | WP_002885838.1 | DUF4651 domain-containing protein | - |
| SSAL_RS00800 (Ssal_00158) | - | 146132..146446 (+) | 315 | WP_002885723.1 | thioredoxin family protein | - |
| SSAL_RS00805 (Ssal_00159) | - | 146450..146974 (+) | 525 | WP_014632552.1 | hypothetical protein | - |
| SSAL_RS00810 (Ssal_00160) | ytpR | 147006..147629 (+) | 624 | WP_002885779.1 | YtpR family tRNA-binding protein | - |
| SSAL_RS00815 (Ssal_00162) | - | 147895..148572 (+) | 678 | WP_045001371.1 | type II CAAX endopeptidase family protein | - |
| SSAL_RS00820 (Ssal_00163) | ssbA | 149000..149392 (+) | 393 | WP_014632554.1 | single-stranded DNA-binding protein | Machinery gene |
| SSAL_RS00825 (Ssal_00164) | tadA | 150162..150680 (+) | 519 | WP_014632555.1 | tRNA adenosine(34) deaminase TadA | - |
| SSAL_RS00830 (Ssal_00165) | - | 150766..151020 (-) | 255 | WP_045001373.1 | hypothetical protein | - |
| SSAL_RS00835 (Ssal_00166) | - | 151068..151235 (-) | 168 | WP_002887002.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| SSAL_RS00840 (Ssal_00167) | - | 151255..151413 (-) | 159 | WP_002885650.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| SSAL_RS00850 (Ssal_00168) | - | 151834..152673 (+) | 840 | WP_002887001.1 | methyltransferase domain-containing protein | - |
| SSAL_RS00855 (Ssal_00169) | - | 152787..153539 (+) | 753 | WP_002887000.1 | HAD family hydrolase | - |
| SSAL_RS00860 (Ssal_00170) | dapD | 153625..154323 (+) | 699 | WP_002886999.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 14759.71 Da Isoelectric Point: 6.9843
>NTDB_id=49380 SSAL_RS00820 WP_014632554.1 149000..149392(+) (ssbA) [Streptococcus salivarius 57.I]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
Nucleotide
Download Length: 393 bp
>NTDB_id=49380 SSAL_RS00820 WP_014632554.1 149000..149392(+) (ssbA) [Streptococcus salivarius 57.I]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.815 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
75.573 |
100 |
0.762 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus mitis SK321 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
73.282 |
100 |
0.738 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.714 |
86.154 |
0.523 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
47.17 |
81.538 |
0.385 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.226 |
81.538 |
0.377 |