Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | INV104_RS09550 | Genome accession | NC_017591 |
| Coordinates | 1808510..1808905 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae INV104 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1803510..1813905
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INV104_RS09525 (INV104_16410) | recX | 1803586..1804362 (+) | 777 | WP_000705094.1 | recombination regulator RecX | - |
| INV104_RS09530 (INV104_16420) | - | 1804451..1804984 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| INV104_RS09535 | - | 1805424..1806180 (-) | 757 | Protein_1820 | epoxyqueuosine reductase QueH | - |
| INV104_RS09540 (INV104_16430) | groL | 1806318..1807940 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| INV104_RS09545 (INV104_16440) | groES | 1807956..1808240 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| INV104_RS09550 (INV104_16450) | ssbB/cilA | 1808510..1808905 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| INV104_RS09555 (INV104_16460) | - | 1808983..1809744 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| INV104_RS09560 (INV104_16470) | ytpR | 1809777..1810403 (-) | 627 | WP_000578316.1 | YtpR family tRNA-binding protein | - |
| INV104_RS09565 (INV104_16480) | - | 1810419..1810736 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| INV104_RS09570 (INV104_16490) | - | 1810733..1811032 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| INV104_RS13845 | - | 1811230..1811310 (-) | 81 | WP_223200442.1 | hypothetical protein | - |
| INV104_RS09575 | - | 1811317..1811508 (-) | 192 | WP_001843938.1 | cell wall-binding repeat protein | - |
| INV104_RS09580 (INV104_16510) | - | 1811669..1812343 (-) | 675 | WP_000725748.1 | LiaF transmembrane domain-containing protein | - |
| INV104_RS09585 (INV104_16520) | - | 1812349..1812795 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| INV104_RS09590 (INV104_16530) | - | 1812909..1813412 (-) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| INV104_RS09595 (INV104_16540) | - | 1813409..1813771 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=49181 INV104_RS09550 WP_000282467.1 1808510..1808905(-) (ssbB/cilA) [Streptococcus pneumoniae INV104]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=49181 INV104_RS09550 WP_000282467.1 1808510..1808905(-) (ssbB/cilA) [Streptococcus pneumoniae INV104]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |