Detailed information NTG0048245

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: SPN034183_RS13410
• Genome accession: NC_021028
• Coordinates: 493405..493845 (-)
• Length: 146 a.a.
• NCBI ID: WP_001808911.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae SPN034183
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 488405..498845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN034183_RS02650 (SPN034183_04880)	-	488873..489211 (+)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-
SPN034183_RS02655 (SPN034183_04890)	comE/blpR	489216..489953 (+)	738	WP_001219127.1	response regulator transcription factor	Regulator
SPN034183_RS02660 (SPN034183_04900)	-	489967..491307 (+)	1341	WP_001017622.1	sensor histidine kinase	-
SPN034183_RS02665 (SPN034183_04910)	blpC	491349..491504 (-)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
SPN034183_RS02670 (SPN034183_04920)	-	491561..492922 (-)	1362	WP_015545695.1	bacteriocin secretion accessory protein	-
SPN034183_RS13405	comA/nlmT	492933..493436 (-)	504	WP_001808910.1	ATP-binding cassette domain-containing protein	Regulator
SPN034183_RS13410	comA/nlmT	493405..493845 (-)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
SPN034183_RS13415	comA/nlmT	493835..494560 (-)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
SPN034183_RS13420 (SPN034183_04940)	comA/nlmT	494505..495092 (-)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
SPN034183_RS02685 (SPN034183_04950)	blpI	495374..495571 (+)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
SPN034183_RS02690	cipB	496038..496187 (+)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
SPN034183_RS02695 (SPN034183_04990)	-	496291..496410 (+)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
SPN034183_RS02705 (SPN034183_05020)	-	497196..497579 (+)	384	WP_000877381.1	hypothetical protein	-
SPN034183_RS02710 (SPN034183_05030)	-	497631..498320 (+)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-
SPN034183_RS02715 (SPN034183_05040)	blpZ	498362..498610 (+)	249	WP_000276499.1	immunity protein BlpZ	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16438.75 Da
• Isoelectric Point: 6.8794

>NTDB_id=48245 SPN034183_RS13410 WP_001808911.1 493405..493845(-) (comA/nlmT) [Streptococcus pneumoniae SPN034183]
MSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKSLAPSY

Nucleotide

• Length: 441 bp

>NTDB_id=48245 SPN034183_RS13410 WP_001808911.1 493405..493845(-) (comA/nlmT) [Streptococcus pneumoniae SPN034183]
ATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAAGTCTTGCGCCGTCATATTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (86-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	71.127	97.26	0.692
comA	Streptococcus mitis NCTC 12261	63.38	97.26	0.616
comA	Streptococcus pneumoniae TIGR4	61.972	97.26	0.603
comA	Streptococcus pneumoniae Rx1	61.972	97.26	0.603
comA	Streptococcus pneumoniae D39	61.972	97.26	0.603
comA	Streptococcus pneumoniae R6	61.972	97.26	0.603
comA	Streptococcus mitis SK321	61.972	97.26	0.603
comA	Streptococcus gordonii str. Challis substr. CH1	59.028	98.63	0.582