Detailed information NTG0048247

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: SPN034183_RS13420
• Genome accession: NC_021028
• Coordinates: 494505..495092 (-)
• Length: 195 a.a.
• NCBI ID: WP_000205166.1
• Uniprot ID: Q9ETN5
• Organism: Streptococcus pneumoniae SPN034183
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 489505..500092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN034183_RS02660 (SPN034183_04900)	-	489967..491307 (+)	1341	WP_001017622.1	sensor histidine kinase	-
SPN034183_RS02665 (SPN034183_04910)	blpC	491349..491504 (-)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
SPN034183_RS02670 (SPN034183_04920)	-	491561..492922 (-)	1362	WP_015545695.1	bacteriocin secretion accessory protein	-
SPN034183_RS13405	comA/nlmT	492933..493436 (-)	504	WP_001808910.1	ATP-binding cassette domain-containing protein	Regulator
SPN034183_RS13410	comA/nlmT	493405..493845 (-)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
SPN034183_RS13415	comA/nlmT	493835..494560 (-)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
SPN034183_RS13420 (SPN034183_04940)	comA/nlmT	494505..495092 (-)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
SPN034183_RS02685 (SPN034183_04950)	blpI	495374..495571 (+)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
SPN034183_RS02690	cipB	496038..496187 (+)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
SPN034183_RS02695 (SPN034183_04990)	-	496291..496410 (+)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
SPN034183_RS02705 (SPN034183_05020)	-	497196..497579 (+)	384	WP_000877381.1	hypothetical protein	-
SPN034183_RS02710 (SPN034183_05030)	-	497631..498320 (+)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-
SPN034183_RS02715 (SPN034183_05040)	blpZ	498362..498610 (+)	249	WP_000276499.1	immunity protein BlpZ	-
SPN034183_RS02720 (SPN034183_05050)	-	498640..499251 (+)	612	WP_000394047.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 195 a.a.
• Molecular weight: 22270.71 Da
• Isoelectric Point: 9.6188

>NTDB_id=48247 SPN034183_RS13420 WP_000205166.1 494505..495092(-) (comA/nlmT) [Streptococcus pneumoniae SPN034183]
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG

Nucleotide

• Length: 588 bp

>NTDB_id=48247 SPN034183_RS13420 WP_000205166.1 494505..495092(-) (comA/nlmT) [Streptococcus pneumoniae SPN034183]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA

Domains

Predicted by InterProScan.

• Peptidase C39 family (Peptidase_C39) (7-142)

3D structure

• AlphaFold DB: Q9ETN5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	59.89	93.333	0.559
comA	Streptococcus mitis NCTC 12261	54.891	94.359	0.518
comA	Streptococcus mitis SK321	54.348	94.359	0.513
comA	Streptococcus pneumoniae TIGR4	53.804	94.359	0.508
comA	Streptococcus pneumoniae Rx1	53.804	94.359	0.508
comA	Streptococcus pneumoniae D39	53.804	94.359	0.508
comA	Streptococcus pneumoniae R6	53.804	94.359	0.508
comA	Streptococcus gordonii str. Challis substr. CH1	52.717	94.359	0.497