Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   HW271_RS03730 Genome accession   NZ_CP058258
Coordinates   757095..757736 (+) Length   213 a.a.
NCBI ID   WP_178894898.1    Uniprot ID   A0A7H8Z8G6
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 752095..762736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS03700 (HW271_03700) frr 752366..752923 (+) 558 WP_178894893.1 ribosome recycling factor -
  HW271_RS03705 (HW271_03705) cvfB 752984..753838 (+) 855 WP_178894894.1 RNA-binding virulence regulatory protein CvfB -
  HW271_RS03710 (HW271_03710) - 753847..754062 (+) 216 WP_001232087.1 YozE family protein -
  HW271_RS03715 (HW271_03715) - 754147..755133 (+) 987 WP_178894895.1 PhoH family protein -
  HW271_RS03720 (HW271_03720) ald 755182..756294 (-) 1113 WP_178894896.1 alanine dehydrogenase -
  HW271_RS03725 (HW271_03725) - 756460..757029 (+) 570 WP_178894897.1 GNAT family N-acetyltransferase -
  HW271_RS03730 (HW271_03730) comEA/celA/cilE 757095..757736 (+) 642 WP_178894898.1 helix-hairpin-helix domain-containing protein Machinery gene
  HW271_RS03735 (HW271_03735) comEC/celB 757720..759930 (+) 2211 WP_178894899.1 ComEC/Rec2 family competence protein Machinery gene
  HW271_RS03740 (HW271_03740) - 760053..761339 (+) 1287 WP_178894900.1 U32 family peptidase -
  HW271_RS03745 (HW271_03745) - 761353..761664 (+) 312 WP_178894901.1 CHY zinc finger protein -
  HW271_RS03750 (HW271_03750) - 761905..762105 (+) 201 WP_001054551.1 F0F1 ATP synthase subunit C -

Sequence


Protein


Download         Length: 213 a.a.        Molecular weight: 23262.29 Da        Isoelectric Point: 4.9302

>NTDB_id=463216 HW271_RS03730 WP_178894898.1 757095..757736(+) (comEA/celA/cilE) [Streptococcus sp. oral taxon 061 strain F0704]
MEELIEKIKEYKIIVICASLGLVLGGFFLLKPVAQTPAKESNLQTEVTIVSKDSTDENEDKNQKEEVVEQDLITVDVKGA
VKSPGIYDLPVGSRINDAVQKAGGLTDNADSKSINLAQRISDEALVYVPTKEEATSQESQSNTSNNKESKKVNLNKASVE
ELKQVKGLGAKRAQDIIDHRESNGKFKSVDDLKKVSGIGAKTIEKLKEYVTVD

Nucleotide


Download         Length: 642 bp        

>NTDB_id=463216 HW271_RS03730 WP_178894898.1 757095..757736(+) (comEA/celA/cilE) [Streptococcus sp. oral taxon 061 strain F0704]
ATGGAAGAACTTATTGAGAAAATCAAAGAATACAAAATCATTGTCATCTGCGCTAGTTTGGGTTTGGTCTTAGGTGGATT
TTTCCTCCTAAAACCAGTCGCTCAAACGCCTGCTAAGGAGAGTAATTTGCAGACTGAAGTTACAATTGTTTCAAAGGATT
CGACGGATGAAAATGAAGATAAAAATCAGAAAGAAGAAGTGGTAGAGCAAGATCTAATTACTGTCGATGTCAAAGGGGCT
GTTAAATCGCCAGGGATTTACGATTTGCCAGTTGGAAGTCGTATCAATGATGCTGTTCAAAAAGCTGGTGGACTGACAGA
TAATGCTGATAGTAAGTCTATCAATCTTGCCCAGAGAATTAGTGACGAAGCACTGGTCTATGTTCCGACCAAGGAAGAAG
CTACCAGTCAAGAATCACAATCAAATACCTCTAACAACAAGGAAAGTAAGAAAGTCAATCTCAATAAAGCCAGTGTAGAG
GAACTTAAACAAGTCAAAGGTTTAGGTGCGAAACGTGCGCAAGATATTATTGACCATCGTGAGTCTAACGGTAAGTTCAA
GTCAGTTGATGATCTCAAAAAGGTTTCTGGTATTGGTGCAAAAACGATAGAAAAGTTAAAAGAGTATGTCACAGTGGATT
AA

Domains


Predicted by InterproScan.

(75-124)

(149-211)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H8Z8G6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

78.241

100

0.793

  comEA/celA/cilE Streptococcus mitis NCTC 12261

77.778

100

0.789

  comEA/celA/cilE Streptococcus mitis SK321

76.389

100

0.775

  comEA/celA/cilE Streptococcus pneumoniae D39

75.926

100

0.77

  comEA/celA/cilE Streptococcus pneumoniae R6

75.926

100

0.77

  comEA/celA/cilE Streptococcus pneumoniae Rx1

75.926

100

0.77

  comEA Streptococcus thermophilus LMD-9

38.428

100

0.413

  comEA Lactococcus lactis subsp. cremoris KW2

38.496

100

0.408

  comEA Staphylococcus aureus N315

36.036

100

0.376

  comEA Staphylococcus aureus MW2

35.616

100

0.366