Detailed information NTG0452649

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: I6I21_RS07245
• Genome accession: NZ_CP065984
• Coordinates: 1439800..1440069 (+)
• Length: 89 a.a.
• NCBI ID: WP_003129998.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain FDAARGOS_1064
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1434800..1445069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I21_RS07220 (I6I21_07220)	-	1437360..1437596 (+)	237	WP_014570799.1	hypothetical protein	-
I6I21_RS07225 (I6I21_07225)	-	1437609..1437959 (+)	351	WP_014570798.1	hypothetical protein	-
I6I21_RS07230 (I6I21_07230)	-	1437972..1438271 (+)	300	WP_014570797.1	phage holin	-
I6I21_RS07235 (I6I21_07235)	-	1438271..1439050 (+)	780	WP_014570796.1	peptidoglycan amidohydrolase family protein	-
I6I21_RS07240 (I6I21_07240)	-	1439129..1439653 (+)	525	WP_014570795.1	GNAT family N-acetyltransferase	-
I6I21_RS07245 (I6I21_07245)	comGC	1439800..1440069 (+)	270	WP_003129998.1	competence type IV pilus major pilin ComGC	Machinery gene
I6I21_RS07250 (I6I21_07250)	comGD	1440029..1440460 (+)	432	WP_014570794.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6I21_RS07255 (I6I21_07255)	comGE	1440432..1440728 (+)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6I21_RS07260 (I6I21_07260)	comGF	1440691..1441137 (+)	447	WP_029344525.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6I21_RS07265 (I6I21_07265)	comGG	1441176..1441460 (+)	285	WP_003129993.1	competence type IV pilus minor pilin ComGG	Machinery gene
I6I21_RS07270 (I6I21_07270)	-	1441550..1441987 (+)	438	WP_003129992.1	zinc-dependent MarR family transcriptional regulator	-
I6I21_RS07275 (I6I21_07275)	-	1441984..1442826 (+)	843	WP_003129990.1	metal ABC transporter substrate-binding protein	-
I6I21_RS07280 (I6I21_07280)	-	1443003..1443740 (+)	738	WP_003129989.1	metal ABC transporter ATP-binding protein	-
I6I21_RS07285 (I6I21_07285)	-	1443733..1444542 (+)	810	WP_014570791.1	metal ABC transporter permease	-

Sequence

Protein

• Length: 89 a.a.
• Molecular weight: 10123.56 Da
• Isoelectric Point: 4.2950

>NTDB_id=452649 I6I21_RS07245 WP_003129998.1 1439800..1440069(+) (comGC) [Lactococcus lactis strain FDAARGOS_1064]
MLIVLAIISILILLFVPNLIKEKSQVQKTGEAAVVKVVESQAQLYELDHDDEKPSLPELLSAGMITQKQISAYDNYYDQN
KNEERNFND

Nucleotide

• Length: 270 bp

>NTDB_id=452649 I6I21_RS07245 WP_003129998.1 1439800..1440069(+) (comGC) [Lactococcus lactis strain FDAARGOS_1064]
ATGTTAATTGTACTAGCTATTATTAGTATTTTAATATTACTATTTGTTCCAAATTTAATTAAAGAAAAATCACAAGTTCA
AAAAACTGGAGAAGCGGCAGTTGTAAAAGTAGTAGAAAGTCAAGCTCAACTTTATGAATTAGATCATGATGATGAGAAGC
CGAGTCTGCCAGAATTGCTCAGCGCTGGGATGATTACTCAAAAACAAATTTCTGCTTACGATAATTACTATGATCAGAAC
AAAAATGAAGAACGAAATTTTAATGACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	86.667	84.27	0.73
comGC/cglC	Streptococcus pneumoniae Rx1	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae D39	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae R6	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae TIGR4	55.056	100	0.551
comGC	Streptococcus gordonii str. Challis substr. CH1	56.471	95.506	0.539
comGC	Streptococcus suis isolate S10	58.904	82.022	0.483
comGC/cglC	Streptococcus mitis SK321	53.947	85.393	0.461
comGC	Streptococcus mutans UA140	50.685	82.022	0.416
comGC	Streptococcus mutans UA159	50.685	82.022	0.416
comGC/cglC	Streptococcus mitis NCTC 12261	56.25	71.91	0.404