Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABZJ_RS04305 | Genome accession | NC_017171 |
| Coordinates | 912132..912566 (-) | Length | 144 a.a. |
| NCBI ID | WP_000993717.1 | Uniprot ID | A0AAN5WG10 |
| Organism | Acinetobacter baumannii MDR-ZJ06 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 907132..917566
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABZJ_RS04280 (ABZJ_03560) | - | 907490..907873 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| ABZJ_RS04285 (ABZJ_03561) | - | 908083..908277 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABZJ_RS04290 (ABZJ_03562) | bfr | 908522..908986 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABZJ_RS04295 (ABZJ_03563) | - | 909028..910656 (-) | 1629 | WP_001988049.1 | PglL family O-oligosaccharyltransferase | - |
| ABZJ_RS04300 (ABZJ_03564) | - | 910764..912074 (-) | 1311 | WP_000914629.1 | O-antigen ligase | - |
| ABZJ_RS04305 (ABZJ_03565) | pilA | 912132..912566 (-) | 435 | WP_000993717.1 | pilin | Machinery gene |
| ABZJ_RS04310 (ABZJ_03566) | - | 912908..913468 (-) | 561 | WP_000258955.1 | TPM domain-containing protein | - |
| ABZJ_RS04315 (ABZJ_03567) | - | 913462..914544 (-) | 1083 | WP_001246375.1 | YgcG family protein | - |
| ABZJ_RS04320 (ABZJ_03568) | - | 914566..915156 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| ABZJ_RS04325 (ABZJ_03569) | - | 915287..916174 (-) | 888 | WP_001017314.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14873.98 Da Isoelectric Point: 8.1106
>NTDB_id=45030 ABZJ_RS04305 WP_000993717.1 912132..912566(-) (pilA) [Acinetobacter baumannii MDR-ZJ06]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=45030 ABZJ_RS04305 WP_000993717.1 912132..912566(-) (pilA) [Acinetobacter baumannii MDR-ZJ06]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
53.061 |
100 |
0.542 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae strain A1552 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae C6706 |
44.966 |
100 |
0.465 |
| pilA | Pseudomonas aeruginosa PAK |
41.558 |
100 |
0.444 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.366 |
98.611 |
0.437 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.431 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.553 |
97.917 |
0.417 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |