Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BCF_RS27040 | Genome accession | NC_016779 |
| Coordinates | 5209482..5210003 (-) | Length | 173 a.a. |
| NCBI ID | WP_000981967.1 | Uniprot ID | A0A063CSK8 |
| Organism | Bacillus cereus F837/76 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5204482..5215003
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCF_RS27020 (bcf_27475) | rplI | 5205692..5206138 (-) | 447 | WP_000864235.1 | 50S ribosomal protein L9 | - |
| BCF_RS27025 (bcf_27480) | - | 5206135..5208108 (-) | 1974 | WP_001113900.1 | DHH family phosphoesterase | - |
| BCF_RS27030 (bcf_27485) | - | 5208187..5209122 (-) | 936 | WP_000799149.1 | YybS family protein | - |
| BCF_RS27035 (bcf_27490) | rpsR | 5209203..5209436 (-) | 234 | WP_000918874.1 | 30S ribosomal protein S18 | - |
| BCF_RS27040 (bcf_27495) | ssbA | 5209482..5210003 (-) | 522 | WP_000981967.1 | single-stranded DNA-binding protein | Machinery gene |
| BCF_RS27045 (bcf_27500) | rpsF | 5210030..5210320 (-) | 291 | WP_001233779.1 | 30S ribosomal protein S6 | - |
| BCF_RS27050 (bcf_27505) | ychF | 5210512..5211612 (-) | 1101 | WP_000524669.1 | redox-regulated ATPase YchF | - |
| BCF_RS27055 (bcf_27510) | - | 5211728..5211925 (-) | 198 | WP_000436051.1 | DUF951 domain-containing protein | - |
| BCF_RS27060 (bcf_27515) | - | 5211946..5212827 (-) | 882 | WP_000382909.1 | mechanosensitive ion channel family protein | - |
| BCF_RS27065 (bcf_27520) | yyaC | 5213087..5213683 (+) | 597 | WP_001020723.1 | spore protease YyaC | - |
| BCF_RS27070 (bcf_27525) | spo0J | 5213704..5214555 (-) | 852 | WP_001051840.1 | stage 0 sporulation protein Spo0J | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18823.61 Da Isoelectric Point: 4.9327
>NTDB_id=43359 BCF_RS27040 WP_000981967.1 5209482..5210003(-) (ssbA) [Bacillus cereus F837/76]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNV
GQPIDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNV
GQPIDISDDDLPF
Nucleotide
Download Length: 522 bp
>NTDB_id=43359 BCF_RS27040 WP_000981967.1 5209482..5210003(-) (ssbA) [Bacillus cereus F837/76]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAGCGTGTATATGTAACAGAAGTTCTTGCGGAAAGCGTACAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTG
GTCAATCTAGTAATTCGGGCAACCAAGGTAACCAAGGAAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTA
GGTCAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAGCGTGTATATGTAACAGAAGTTCTTGCGGAAAGCGTACAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTG
GTCAATCTAGTAATTCGGGCAACCAAGGTAACCAAGGAAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTA
GGTCAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.316 |
100 |
0.74 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.286 |
100 |
0.59 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
61.272 |
0.399 |
| ssb | Glaesserella parasuis strain SC1401 |
36.264 |
100 |
0.382 |