Detailed information NTG0043354

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BCF_RS25575
• Genome accession: NC_016779
• Coordinates: 4894478..4895827 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225368.1
• Uniprot ID: -
• Organism: Bacillus cereus F837/76
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4889478..4900827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCF_RS25555 (bcf_25955)	secA	4889800..4892307 (-)	2508	WP_000579383.1	preprotein translocase subunit SecA	-
BCF_RS25560 (bcf_25960)	hpf	4892584..4893126 (-)	543	WP_000671189.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
BCF_RS25565 (bcf_25970)	cspC	4893450..4893647 (-)	198	WP_001990088.1	cold shock protein CspC	-
BCF_RS25570 (bcf_25975)	comFC	4893774..4894478 (-)	705	WP_041184339.1	comF operon protein ComFC	-
BCF_RS25575 (bcf_25980)	comFA	4894478..4895827 (-)	1350	WP_000225368.1	ATP-dependent helicase ComFA	Machinery gene
BCF_RS25580 (bcf_25985)	-	4895955..4897295 (-)	1341	WP_000734331.1	NlpC/P60 family protein	-
BCF_RS25585 (bcf_25990)	-	4897549..4897863 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
BCF_RS25595 (bcf_25995)	-	4898037..4898879 (-)	843	WP_000844766.1	DegV family protein	-
BCF_RS25600 (bcf_26000)	-	4899119..4899754 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51268.96 Da
• Isoelectric Point: 9.7782

>NTDB_id=43354 BCF_RS25575 WP_000225368.1 4894478..4895827(-) (comFA) [Bacillus cereus F837/76]
MVAGKQLLLEELSSDLRRELSDSKKKGEIICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCNKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEMSLLLKGLDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=43354 BCF_RS25575 WP_000225368.1 4894478..4895827(-) (comFA) [Bacillus cereus F837/76]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTCGAAAAAGAAGGG
AGAGATCATATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAATAAAGTATGTACGTATTGCCGCAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGTGGGATTCACGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCCGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATGAGCCTGTTATTGAAAGGGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAGGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCACTACGGCAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.843	96.659	0.501
comFA	Latilactobacillus sakei subsp. sakei 23K	40.75	89.087	0.363