Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BDGL_002647 | Genome accession | NC_016603 |
| Coordinates | 2839756..2840190 (-) | Length | 144 a.a. |
| NCBI ID | YP_004996915.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii PHEA-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2834756..2845190
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BDGL_002641 | - | 2835103..2835486 (+) | 384 | YP_004996909.1 | hypothetical protein | - |
| BDGL_002642 | - | 2835476..2835604 (-) | 129 | YP_004996910.1 | hypothetical protein | - |
| BDGL_002643 | bfd | 2835719..2835901 (+) | 183 | YP_004996911.1 | putative regulatory or redox component complexing with Bfr, in iron storage and mobility (Bfd) | - |
| BDGL_002644 | bfrB | 2836145..2836609 (+) | 465 | YP_004996912.1 | bacterioferritin | - |
| BDGL_002645 | - | 2836650..2838278 (-) | 1629 | YP_004996913.1 | hypothetical protein | - |
| BDGL_002646 | - | 2838384..2839697 (-) | 1314 | YP_004996914.1 | hypothetical protein | - |
| BDGL_002647 | pilA | 2839756..2840190 (-) | 435 | YP_004996915.1 | type IV pilus assembly protein PilA | Machinery gene |
| BDGL_002648 | - | 2840538..2841098 (-) | 561 | YP_004996916.1 | hypothetical protein | - |
| BDGL_002649 | - | 2841092..2842174 (-) | 1083 | YP_004996917.1 | hypothetical protein | - |
| BDGL_002650 | - | 2842199..2842789 (-) | 591 | YP_004996918.1 | hypothetical protein | - |
| BDGL_002651 | - | 2842920..2843807 (-) | 888 | YP_004996919.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14802.90 Da Isoelectric Point: 8.1106
>NTDB_id=42982 BDGL_002647 YP_004996915.1 2839756..2840190(-) (pilA) [Acinetobacter pittii PHEA-2]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQASTNAC
AVTANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQASTNAC
AVTANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=42982 BDGL_002647 YP_004996915.1 2839756..2840190(-) (pilA) [Acinetobacter pittii PHEA-2]
ATGAATGCACAAAAAGGTTTTACTTTAATTGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCAGCAATCGCGAT
TCCTGCATATCAAAACTATATTGCTAAGTCACAAGTAAGTACTGGCTTGGCTGATATTACAGCTGGTAAAACAAATGCAG
AAACTAAATTGGCAGAAGGTTTAACCGCTGCATTAACCGATGTAACAACTTTAGGCTTACAAGCATCTACGAATGCTTGT
GCTGTTACAGCGAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACACTGAAGGGTACATCACAAATTAATGGTAA
GAAAATTGAATGGATCCGTGATGCGGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAGACAGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACTTTAATTGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCAGCAATCGCGAT
TCCTGCATATCAAAACTATATTGCTAAGTCACAAGTAAGTACTGGCTTGGCTGATATTACAGCTGGTAAAACAAATGCAG
AAACTAAATTGGCAGAAGGTTTAACCGCTGCATTAACCGATGTAACAACTTTAGGCTTACAAGCATCTACGAATGCTTGT
GCTGTTACAGCGAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACACTGAAGGGTACATCACAAATTAATGGTAA
GAAAATTGAATGGATCCGTGATGCGGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAGACAGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
52.381 |
100 |
0.535 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
43.709 |
100 |
0.458 |
| pilA | Vibrio cholerae strain A1552 |
43.709 |
100 |
0.458 |
| pilA | Vibrio cholerae C6706 |
43.709 |
100 |
0.458 |
| pilA | Pseudomonas aeruginosa PAK |
42.208 |
100 |
0.451 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
45.07 |
98.611 |
0.444 |
| comP | Acinetobacter baylyi ADP1 |
41.447 |
100 |
0.437 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
43.972 |
97.917 |
0.431 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |