Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | G0030_RS01380 | Genome accession | NZ_CP048681 |
| Coordinates | 298050..298490 (+) | Length | 146 a.a. |
| NCBI ID | WP_180182068.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain Q186-3_T | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 293050..303490
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0030_RS01360 (G0030_01360) | - | 294569..295453 (+) | 885 | WP_180182070.1 | metal-dependent hydrolase | - |
| G0030_RS01365 (G0030_01365) | - | 295619..296209 (+) | 591 | WP_005180484.1 | LemA family protein | - |
| G0030_RS01370 (G0030_01370) | - | 296236..297300 (+) | 1065 | WP_180182069.1 | YgcG family protein | - |
| G0030_RS01375 (G0030_01375) | - | 297294..297854 (+) | 561 | WP_104487965.1 | TPM domain-containing protein | - |
| G0030_RS01380 (G0030_01380) | pilA | 298050..298490 (+) | 441 | WP_180182068.1 | pilin | Machinery gene |
| G0030_RS01385 (G0030_01385) | - | 298636..300234 (+) | 1599 | WP_227554618.1 | O-antigen ligase | - |
| G0030_RS01390 (G0030_01390) | - | 300294..300959 (+) | 666 | Protein_265 | IS5 family transposase | - |
| G0030_RS01395 (G0030_01395) | - | 301044..302684 (+) | 1641 | WP_180182088.1 | PglL family O-oligosaccharyltransferase | - |
| G0030_RS01400 (G0030_01400) | bfr | 302796..303260 (-) | 465 | WP_005180468.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 14929.09 Da Isoelectric Point: 8.1106
>NTDB_id=422226 G0030_RS01380 WP_180182068.1 298050..298490(+) (pilA) [Acinetobacter indicus strain Q186-3_T]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYTAKSQVAAGLAEISPAKTNAEAKLAEGVSATITSASALGISTSKRCT
ALSVSVAKTGESSITCTLAGTTSINGRKIQWVRGADNTDGTIGTWTCKTNVADDFIPKTCESASIS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYTAKSQVAAGLAEISPAKTNAEAKLAEGVSATITSASALGISTSKRCT
ALSVSVAKTGESSITCTLAGTTSINGRKIQWVRGADNTDGTIGTWTCKTNVADDFIPKTCESASIS
Nucleotide
Download Length: 441 bp
>NTDB_id=422226 G0030_RS01380 WP_180182068.1 298050..298490(+) (pilA) [Acinetobacter indicus strain Q186-3_T]
ATGAACGCTCAAAAAGGTTTTACCCTTATCGAATTGATGATCGTTGTAGCGATTATTGGTATTTTGGCTGCAATTGCGAT
TCCTGCGTACCAAAACTATACAGCTAAGTCGCAAGTAGCTGCTGGTTTAGCAGAAATTTCACCTGCAAAAACAAATGCTG
AAGCTAAATTAGCAGAAGGTGTTTCTGCTACTATTACATCTGCATCTGCATTAGGAATTTCAACTTCTAAAAGATGTACA
GCATTAAGTGTATCTGTTGCTAAAACAGGTGAATCTAGTATTACCTGTACATTGGCTGGGACTACCTCTATTAATGGTCG
GAAAATTCAATGGGTTCGTGGCGCTGATAATACAGATGGTACAATCGGTACTTGGACATGCAAGACGAATGTGGCCGATG
ATTTTATTCCAAAAACTTGTGAATCTGCTTCAATCAGTTAA
ATGAACGCTCAAAAAGGTTTTACCCTTATCGAATTGATGATCGTTGTAGCGATTATTGGTATTTTGGCTGCAATTGCGAT
TCCTGCGTACCAAAACTATACAGCTAAGTCGCAAGTAGCTGCTGGTTTAGCAGAAATTTCACCTGCAAAAACAAATGCTG
AAGCTAAATTAGCAGAAGGTGTTTCTGCTACTATTACATCTGCATCTGCATTAGGAATTTCAACTTCTAAAAGATGTACA
GCATTAAGTGTATCTGTTGCTAAAACAGGTGAATCTAGTATTACCTGTACATTGGCTGGGACTACCTCTATTAATGGTCG
GAAAATTCAATGGGTTCGTGGCGCTGATAATACAGATGGTACAATCGGTACTTGGACATGCAAGACGAATGTGGCCGATG
ATTTTATTCCAAAAACTTGTGAATCTGCTTCAATCAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
50 |
97.26 |
0.486 |
| pilA | Pseudomonas aeruginosa PAK |
42.581 |
100 |
0.452 |
| comP | Acinetobacter baylyi ADP1 |
40.645 |
100 |
0.432 |
| pilA | Vibrio cholerae C6706 |
43.056 |
98.63 |
0.425 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
43.056 |
98.63 |
0.425 |
| pilA | Vibrio cholerae strain A1552 |
43.056 |
98.63 |
0.425 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
43.972 |
96.575 |
0.425 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
37.195 |
100 |
0.418 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.446 |
95.205 |
0.404 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
43.2 |
85.616 |
0.37 |