Detailed information NTG0042034

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SPPN_RS10345
• Genome accession: NC_015875
• Coordinates: 1982402..1982836 (-)
• Length: 144 a.a.
• NCBI ID: WP_044012294.1
• Uniprot ID: -
• Organism: Streptococcus pseudopneumoniae IS7493
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1977402..1987836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPPN_RS10315 (SPPN_10440)	-	1978030..1979232 (+)	1203	WP_000855226.1	ATP-grasp domain-containing protein	-
SPPN_RS10320 (SPPN_10445)	-	1979345..1979821 (+)	477	WP_000777684.1	GNAT family N-acetyltransferase	-
SPPN_RS10325 (SPPN_10450)	-	1980018..1980860 (+)	843	WP_000840058.1	helix-turn-helix domain-containing protein	-
SPPN_RS10330 (SPPN_10455)	comGG/cglG	1981322..1981735 (-)	414	WP_000265635.1	competence type IV pilus minor pilin ComGG	Machinery gene
SPPN_RS10335 (SPPN_10460)	comGF/cglF	1981713..1982174 (-)	462	WP_000250511.1	competence type IV pilus minor pilin ComGF	Machinery gene
SPPN_RS10340 (SPPN_10465)	comGE/cglE	1982137..1982439 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
SPPN_RS10345 (SPPN_10470)	comGD/cglD	1982402..1982836 (-)	435	WP_044012294.1	competence type IV pilus minor pilin ComGD	Machinery gene
SPPN_RS10350 (SPPN_10475)	comGC/cglC	1982799..1983122 (-)	324	WP_000738647.1	comG operon protein ComGC	Machinery gene
SPPN_RS10355 (SPPN_10480)	comGB/cglB	1983124..1984140 (-)	1017	WP_080564700.1	competence type IV pilus assembly protein ComGB	Machinery gene
SPPN_RS10360 (SPPN_10485)	comGA/cglA/cilD	1984088..1985029 (-)	942	WP_000249547.1	competence type IV pilus ATPase ComGA	Machinery gene
SPPN_RS10365 (SPPN_10490)	-	1985105..1985470 (-)	366	WP_000286407.1	DUF1033 family protein	-
SPPN_RS10370 (SPPN_10495)	-	1985621..1986658 (-)	1038	Protein_2082	zinc-dependent alcohol dehydrogenase family protein	-
SPPN_RS10375 (SPPN_10500)	-	1986977..1987216 (-)	240	WP_000907298.1	hypothetical protein	-
SPPN_RS10380 (SPPN_10505)	-	1987330..1987764 (-)	435	WP_000355912.1	cytidine deaminase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15874.32 Da
• Isoelectric Point: 10.5548

>NTDB_id=42034 SPPN_RS10345 WP_044012294.1 1982402..1982836(-) (comGD/cglD) [Streptococcus pseudopneumoniae IS7493]
MQNKIRLKPLQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQSPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=42034 SPPN_RS10345 WP_044012294.1 1982402..1982836(-) (comGD/cglD) [Streptococcus pseudopneumoniae IS7493]
ATGCAAAACAAAATAAGACTCAAACCGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGCCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCAGGCTCTGTCCAGTCTACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACG
ATTAGCAATGGCAGTCAAAAGTTGACAGTCCCTAAAGGGATTCAGTCACCATCGGGACAAAGTATTACATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	95.833	100	0.958
comGD/cglD	Streptococcus pneumoniae Rx1	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae D39	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae R6	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae TIGR4	96.992	92.361	0.896
comYD	Streptococcus gordonii str. Challis substr. CH1	57.463	93.056	0.535
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444