Detailed information NTG0042032

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SPPN_RS10335
• Genome accession: NC_015875
• Coordinates: 1981713..1982174 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250511.1
• Uniprot ID: -
• Organism: Streptococcus pseudopneumoniae IS7493
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1976713..1987174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPPN_RS10310 (SPPN_10435)	-	1977129..1978028 (+)	900	WP_000771264.1	hypothetical protein	-
SPPN_RS10315 (SPPN_10440)	-	1978030..1979232 (+)	1203	WP_000855226.1	ATP-grasp domain-containing protein	-
SPPN_RS10320 (SPPN_10445)	-	1979345..1979821 (+)	477	WP_000777684.1	GNAT family N-acetyltransferase	-
SPPN_RS10325 (SPPN_10450)	-	1980018..1980860 (+)	843	WP_000840058.1	helix-turn-helix domain-containing protein	-
SPPN_RS10330 (SPPN_10455)	comGG/cglG	1981322..1981735 (-)	414	WP_000265635.1	competence type IV pilus minor pilin ComGG	Machinery gene
SPPN_RS10335 (SPPN_10460)	comGF/cglF	1981713..1982174 (-)	462	WP_000250511.1	competence type IV pilus minor pilin ComGF	Machinery gene
SPPN_RS10340 (SPPN_10465)	comGE/cglE	1982137..1982439 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
SPPN_RS10345 (SPPN_10470)	comGD/cglD	1982402..1982836 (-)	435	WP_044012294.1	competence type IV pilus minor pilin ComGD	Machinery gene
SPPN_RS10350 (SPPN_10475)	comGC/cglC	1982799..1983122 (-)	324	WP_000738647.1	comG operon protein ComGC	Machinery gene
SPPN_RS10355 (SPPN_10480)	comGB/cglB	1983124..1984140 (-)	1017	WP_080564700.1	competence type IV pilus assembly protein ComGB	Machinery gene
SPPN_RS10360 (SPPN_10485)	comGA/cglA/cilD	1984088..1985029 (-)	942	WP_000249547.1	competence type IV pilus ATPase ComGA	Machinery gene
SPPN_RS10365 (SPPN_10490)	-	1985105..1985470 (-)	366	WP_000286407.1	DUF1033 family protein	-
SPPN_RS10370 (SPPN_10495)	-	1985621..1986658 (-)	1038	Protein_2082	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17868.55 Da
• Isoelectric Point: 9.3016

>NTDB_id=42032 SPPN_RS10335 WP_000250511.1 1981713..1982174(-) (comGF/cglF) [Streptococcus pseudopneumoniae IS7493]
MVQNSCWLSKSHKVKAFTLLESLIALIVISGSLLLFQAMSQLLISDVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKEIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQVVRFRFQFKKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=42032 SPPN_RS10335 WP_000250511.1 1981713..1982174(-) (comGF/cglF) [Streptococcus pseudopneumoniae IS7493]
ATGGTTCAGAACAGTTGTTGGCTATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCTTGATTGCCCTCAT
TGTCATCAGTGGAAGCTTACTTCTCTTTCAAGCCATGAGTCAGCTCCTCATTTCAGATGTTCGCTATCAGCAGCAAAGCG
AGCAAAAAGAGTGGCTCTTGTTTGTGGACCAGTTGGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTCTATATGAAGCAGGATGGCAAGGAAATTGCGATAGGCAAGTCTAAATCAGATGATTTTCGGAAAACCGATGCCAG
TGGACGGGGTTATCAGCCGATGGTTTATGGCCTCAAATCCGCACAGATTACAGAGGACAATCAAGTGGTTCGCTTTCGTT
TCCAGTTCAAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (47-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	94.771	100	0.948
comGF/cglF	Streptococcus mitis SK321	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae Rx1	92.157	100	0.922
comGF/cglF	Streptococcus pneumoniae D39	92.157	100	0.922
comGF/cglF	Streptococcus pneumoniae R6	92.157	100	0.922
comGF/cglF	Streptococcus pneumoniae TIGR4	92.157	100	0.922