Detailed information NTG0041846

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SALIVB_RS09490
• Genome accession: NC_015760
• Coordinates: 2059878..2060270 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius CCHSS3
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2054878..2065270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVB_RS09455 (SALIVB_1974)	dapD	2054964..2055662 (-)	699	WP_013991245.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
SALIVB_RS09460 (SALIVB_1975)	-	2055748..2056500 (-)	753	WP_013991246.1	HAD family hydrolase	-
SALIVB_RS09465 (SALIVB_1976)	-	2056614..2057453 (-)	840	WP_013991247.1	methyltransferase domain-containing protein	-
SALIVB_RS09470 (SALIVB_1977)	-	2057876..2058034 (+)	159	WP_002892000.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
SALIVB_RS09475 (SALIVB_1978)	-	2058055..2058222 (+)	168	WP_013991248.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
SALIVB_RS11150 (SALIVB_1979)	-	2058270..2058524 (+)	255	WP_013991249.1	hypothetical protein	-
SALIVB_RS09485 (SALIVB_1980)	tadA	2058589..2059107 (-)	519	WP_013991250.1	tRNA adenosine(34) deaminase TadA	-
SALIVB_RS09490 (SALIVB_1981)	ssbA	2059878..2060270 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
SALIVB_RS09495 (SALIVB_1982)	-	2060499..2060726 (-)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
SALIVB_RS09500 (SALIVB_1983)	-	2060741..2061772 (-)	1032	WP_013991251.1	YeeE/YedE family protein	-
SALIVB_RS09505 (SALIVB_1984)	ytpR	2061910..2062533 (-)	624	WP_013991252.1	YtpR family tRNA-binding protein	-
SALIVB_RS09510 (SALIVB_1985)	-	2062565..2063089 (-)	525	WP_013991253.1	hypothetical protein	-
SALIVB_RS09515 (SALIVB_1986)	-	2063093..2063407 (-)	315	WP_013991254.1	thioredoxin family protein	-
SALIVB_RS09520 (SALIVB_1987)	-	2063404..2063688 (-)	285	WP_013991255.1	DUF4651 domain-containing protein	-
SALIVB_RS09525 (SALIVB_1988)	pepA	2063788..2064855 (+)	1068	WP_013991256.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=41846 SALIVB_RS09490 WP_002885697.1 2059878..2060270(-) (ssbA) [Streptococcus salivarius CCHSS3]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=41846 SALIVB_RS09490 WP_002885697.1 2059878..2060270(-) (ssbA) [Streptococcus salivarius CCHSS3]
ATGTATAACAAAGTAATTTTAATTGGACGTTTGACAGCTACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCCTCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACCCATTACGTTACCGAGGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385