Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | E3T09_RS02355 | Genome accession | NZ_CP047813 |
| Coordinates | 441916..442227 (+) | Length | 103 a.a. |
| NCBI ID | WP_160186690.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1500 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 436916..447227
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T09_RS02325 (E3T09_02325) | - | 437699..437902 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3T09_RS02330 (E3T09_02330) | - | 437899..438885 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3T09_RS02335 (E3T09_02335) | - | 438885..439214 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3T09_RS02340 (E3T09_02340) | - | 439211..439834 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3T09_RS02345 (E3T09_02345) | comGA | 439886..440860 (+) | 975 | WP_160186689.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3T09_RS02350 (E3T09_02350) | comGB | 440832..441902 (+) | 1071 | WP_000776406.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3T09_RS02355 (E3T09_02355) | comGC | 441916..442227 (+) | 312 | WP_160186690.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3T09_RS02360 (E3T09_02360) | comGD | 442205..442651 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3T09_RS02365 (E3T09_02365) | comGE | 442638..442937 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3T09_RS02370 (E3T09_02370) | comGF | 442855..443352 (+) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3T09_RS02375 (E3T09_02375) | - | 443449..443595 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3T09_RS02380 (E3T09_02380) | - | 443585..444109 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| E3T09_RS02385 (E3T09_02385) | gcvT | 444268..445359 (+) | 1092 | WP_000093345.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3T09_RS02390 (E3T09_02390) | gcvPA | 445379..446725 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11285.33 Da Isoelectric Point: 8.5268
>NTDB_id=417092 E3T09_RS02355 WP_160186690.1 441916..442227(+) (comGC) [Staphylococcus aureus strain UP_1500]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGEAITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGEAITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=417092 E3T09_RS02355 WP_160186690.1 441916..442227(+) (comGC) [Staphylococcus aureus strain UP_1500]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGGCAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGGCAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus pneumoniae R6 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus pneumoniae D39 |
50 |
83.495 |
0.417 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |