Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | E3T17_RS02390 | Genome accession | NZ_CP047805 |
| Coordinates | 452761..453831 (+) | Length | 356 a.a. |
| NCBI ID | WP_000776412.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1654 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 447761..458831
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T17_RS02360 (E3T17_02360) | - | 448184..449647 (+) | 1464 | WP_001017873.1 | rhomboid family protein | - |
| E3T17_RS02365 (E3T17_02365) | - | 449628..449831 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3T17_RS02370 (E3T17_02370) | - | 449828..450814 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3T17_RS02375 (E3T17_02375) | - | 450814..451143 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3T17_RS02380 (E3T17_02380) | - | 451140..451763 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3T17_RS02385 (E3T17_02385) | comGA | 451815..452789 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3T17_RS02390 (E3T17_02390) | comGB | 452761..453831 (+) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3T17_RS02395 (E3T17_02395) | comGC | 453845..454156 (+) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3T17_RS02400 (E3T17_02400) | comGD | 454134..454580 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3T17_RS02405 (E3T17_02405) | comGE | 454567..454866 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3T17_RS02410 (E3T17_02410) | comGF | 454784..455281 (+) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3T17_RS02415 (E3T17_02415) | - | 455378..455524 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3T17_RS02420 (E3T17_02420) | - | 455514..456038 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| E3T17_RS02425 (E3T17_02425) | gcvT | 456197..457288 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3T17_RS02430 (E3T17_02430) | gcvPA | 457308..458654 (+) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41429.85 Da Isoelectric Point: 10.1030
>NTDB_id=416923 E3T17_RS02390 WP_000776412.1 452761..453831(+) (comGB) [Staphylococcus aureus strain UP_1654]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNKILSLIG
YSDTIVLQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNKILSLIG
YSDTIVLQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=416923 E3T17_RS02390 WP_000776412.1 452761..453831(+) (comGB) [Staphylococcus aureus strain UP_1654]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATAAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCCTGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAATTTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
GATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATAAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCCTGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAATTTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
GATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
99.438 |
100 |
0.994 |
| comGB | Staphylococcus aureus N315 |
99.438 |
100 |
0.994 |