Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | GTW28_RS00245 | Genome accession | NZ_CP047485 |
| Coordinates | 43023..43313 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain BJQ0005 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 38023..48313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW28_RS00205 (GTW28_00205) | darA | 38046..38375 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| GTW28_RS00210 (GTW28_00210) | yaaR | 38388..38828 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| GTW28_RS00215 (GTW28_00215) | holB | 38840..39829 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| GTW28_RS00220 (GTW28_00220) | ricT | 39832..40659 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| GTW28_RS00225 (GTW28_00225) | yabA | 40674..41033 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| GTW28_RS00230 (GTW28_00230) | trmNF | 41092..41835 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GTW28_RS00235 (GTW28_00235) | yazA | 41822..42121 (+) | 300 | WP_046380716.1 | GIY-YIG nuclease family protein | - |
| GTW28_RS00240 (GTW28_00240) | rsmI | 42096..42974 (+) | 879 | WP_046380717.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GTW28_RS00245 (GTW28_00245) | abrB | 43023..43313 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| GTW28_RS00250 (GTW28_00250) | metG | 43808..45802 (+) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| GTW28_RS00255 (GTW28_00255) | dayD | 45882..46649 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| GTW28_RS00260 (GTW28_00260) | yabE | 46805..48118 (+) | 1314 | WP_046380719.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=413640 GTW28_RS00245 WP_003226760.1 43023..43313(-) (abrB) [Bacillus subtilis strain BJQ0005]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=413640 GTW28_RS00245 WP_003226760.1 43023..43313(-) (abrB) [Bacillus subtilis strain BJQ0005]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |