Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | GPA00_RS03720 | Genome accession | NZ_CP046629 |
| Coordinates | 717635..718030 (+) | Length | 131 a.a. |
| NCBI ID | WP_157327528.1 | Uniprot ID | - |
| Organism | Streptococcus equinus strain CNU G6 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 712635..723030
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPA00_RS03685 (GPA00_03685) | - | 712779..713414 (+) | 636 | WP_141348477.1 | CPBP family intramembrane glutamic endopeptidase | - |
| GPA00_RS03690 (GPA00_03690) | proC | 713466..714236 (-) | 771 | WP_157327526.1 | pyrroline-5-carboxylate reductase | - |
| GPA00_RS03695 (GPA00_03695) | pepA | 714298..715365 (-) | 1068 | WP_074534071.1 | glutamyl aminopeptidase | - |
| GPA00_RS03700 (GPA00_03700) | - | 715482..715775 (+) | 294 | WP_027968030.1 | DUF4651 domain-containing protein | - |
| GPA00_RS03705 (GPA00_03705) | - | 715768..716085 (+) | 318 | WP_021141448.1 | thioredoxin family protein | - |
| GPA00_RS03710 (GPA00_03710) | ytpR | 716094..716720 (+) | 627 | WP_003067880.1 | YtpR family tRNA-binding protein | - |
| GPA00_RS03715 (GPA00_03715) | - | 716807..717523 (-) | 717 | WP_198362636.1 | class I SAM-dependent methyltransferase | - |
| GPA00_RS03720 (GPA00_03720) | ssbA | 717635..718030 (+) | 396 | WP_157327528.1 | single-stranded DNA-binding protein | Machinery gene |
| GPA00_RS03725 (GPA00_03725) | - | 718211..719011 (+) | 801 | WP_039697668.1 | Cof-type HAD-IIB family hydrolase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14881.86 Da Isoelectric Point: 5.7866
>NTDB_id=406298 GPA00_RS03720 WP_157327528.1 717635..718030(+) (ssbA) [Streptococcus equinus strain CNU G6]
MYNKVIMIGRLTAQPELVTTANDKSVTRVTLAVNRRFKSQNGEREADFISLVVWGRLAETFVSYAGKGSLLSVDGELRTR
KYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLADLVLEEEELPF
MYNKVIMIGRLTAQPELVTTANDKSVTRVTLAVNRRFKSQNGEREADFISLVVWGRLAETFVSYAGKGSLLSVDGELRTR
KYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=406298 GPA00_RS03720 WP_157327528.1 717635..718030(+) (ssbA) [Streptococcus equinus strain CNU G6]
ATGTACAATAAAGTAATTATGATTGGGCGCTTGACGGCGCAACCTGAACTTGTGACGACAGCTAACGATAAAAGTGTTAC
ACGTGTAACACTTGCGGTCAATCGACGTTTTAAATCGCAAAATGGTGAGCGTGAGGCTGACTTCATTTCGCTGGTGGTGT
GGGGACGTTTGGCAGAAACATTTGTGTCTTATGCAGGCAAAGGCAGCTTACTTTCTGTTGATGGCGAGCTTCGCACACGC
AAATATGAAAAAGATGGTCACACGAATTATGTGACAGAAGTGTTATGCCATTCTTTCCAACTCTTAGAAAGTCGCGCACA
GCGTGCTATGCGAGAAAATAATGTGGCAAATGATTTGGCAGATTTAGTTCTGGAAGAGGAGGAATTGCCATTTTAG
ATGTACAATAAAGTAATTATGATTGGGCGCTTGACGGCGCAACCTGAACTTGTGACGACAGCTAACGATAAAAGTGTTAC
ACGTGTAACACTTGCGGTCAATCGACGTTTTAAATCGCAAAATGGTGAGCGTGAGGCTGACTTCATTTCGCTGGTGGTGT
GGGGACGTTTGGCAGAAACATTTGTGTCTTATGCAGGCAAAGGCAGCTTACTTTCTGTTGATGGCGAGCTTCGCACACGC
AAATATGAAAAAGATGGTCACACGAATTATGTGACAGAAGTGTTATGCCATTCTTTCCAACTCTTAGAAAGTCGCGCACA
GCGTGCTATGCGAGAAAATAATGTGGCAAATGATTTGGCAGATTTAGTTCTGGAAGAGGAGGAATTGCCATTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.153 |
100 |
0.802 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
75.573 |
100 |
0.756 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
61.404 |
87.023 |
0.534 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.887 |
80.916 |
0.42 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.154 |
89.313 |
0.412 |