Detailed information NTG0406188

Bioinformatically predicted

Overview

• Name: comD/comD2
• Type: Regulator
• Locus tag: GO995_RS08480
• Genome accession: NZ_CP046624
• Coordinates: 1701722..1702654 (-)
• Length: 310 a.a.
• NCBI ID: WP_238385869.1
• Uniprot ID: -
• Organism: Streptococcus ruminicola strain CNU_G3
• Function: phosphorylation of ComE (predicted from homology) Competence regulation

Genomic Context

Location: 1696722..1707654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO995_RS08455 (GO995_08455)	rpe	1697073..1697735 (-)	663	WP_074560922.1	ribulose-phosphate 3-epimerase	-
GO995_RS08460 (GO995_08460)	rsgA	1697742..1698614 (-)	873	WP_006531894.1	ribosome small subunit-dependent GTPase A	-
GO995_RS08470 (GO995_08470)	comE/comE2	1698932..1699666 (-)	735	WP_052071091.1	LytR/AlgR family response regulator transcription factor	Regulator
GO995_RS08475 (GO995_08475)	comD/comD3	1700327..1701709 (-)	1383	WP_157629395.1	sensor histidine kinase	Regulator
GO995_RS08480 (GO995_08480)	comD/comD2	1701722..1702654 (-)	933	WP_238385869.1	sensor histidine kinase	Regulator
GO995_RS08485 (GO995_08485)	-	1703447..1703740 (-)	294	WP_157629397.1	bacteriocin immunity protein	-
GO995_RS08490 (GO995_08490)	-	1703768..1704073 (-)	306	WP_157629398.1	bacteriocin immunity protein	-
GO995_RS08495 (GO995_08495)	-	1704086..1704235 (-)	150	WP_093815783.1	bacteriocin	-
GO995_RS08500 (GO995_08500)	comC/comC1	1704497..1704649 (+)	153	WP_157327338.1	hypothetical protein	Regulator
GO995_RS08505 (GO995_08505)	comD/comD1	1704672..1705943 (-)	1272	WP_238385870.1	sensor histidine kinase	Regulator
GO995_RS08510 (GO995_08510)	comE/comE1	1706003..1706734 (-)	732	WP_157629399.1	response regulator transcription factor	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35523.69 Da
• Isoelectric Point: 4.9576

>NTDB_id=406188 GO995_RS08480 WP_238385869.1 1701722..1702654(-) (comD/comD2) [Streptococcus ruminicola strain CNU_G3]
MYYLVSRWLNIDISNVSQSLKKHIEPKIFNIINILMVSYFLFMDAIAIVKPFHNADNDAIRGIVAFIYLILLFVFLFYLN
FRHGQEQKNELLRNQEMELAALENYSKHVESLYQEVRSFRHDYANILMSLKVGIDQGNLDDIKKIYDEITADSTKLVKNN
KFDLTRLANITDSGVKSLMSAKFLQAENQGIAISLEVAEKMGNPSIPLISYIRILSILFDNAIEAALESAEPRISVANFY
QDGDFVFMIENSTKEKSVDLTKIFERGYSTKGDNRGLGLATLMDFQDDYENLSVETHSSDYTFTQVVRIV

Nucleotide

• Length: 933 bp

>NTDB_id=406188 GO995_RS08480 WP_238385869.1 1701722..1702654(-) (comD/comD2) [Streptococcus ruminicola strain CNU_G3]
GTGTATTATTTAGTTTCACGATGGTTAAATATTGATATTTCAAATGTAAGTCAAAGTTTAAAAAAACACATCGAGCCAAA
AATTTTTAATATTATTAATATCTTGATGGTCTCTTATTTTTTATTCATGGATGCCATTGCTATTGTAAAACCTTTTCATA
ATGCTGATAACGATGCAATAAGAGGAATTGTTGCTTTCATTTATCTCATCCTTCTTTTCGTCTTCCTCTTTTATCTCAAT
TTCCGTCATGGGCAAGAGCAGAAAAATGAATTGCTTCGCAATCAGGAGATGGAGCTTGCAGCACTTGAAAATTATAGCAA
ACACGTGGAAAGCCTTTATCAAGAAGTGCGCAGTTTCAGGCATGACTACGCTAATATTCTGATGAGTTTAAAGGTTGGAA
TTGATCAAGGCAATCTTGATGACATCAAGAAAATTTACGACGAAATCACGGCCGATTCGACGAAACTGGTCAAAAATAAT
AAATTTGATTTGACTCGCTTGGCTAACATCACAGACAGCGGCGTCAAAAGTCTCATGTCAGCCAAATTCTTGCAAGCTGA
AAATCAAGGGATTGCGATTAGCTTGGAAGTTGCTGAAAAAATGGGAAATCCTAGCATTCCATTGATTTCCTACATCCGAA
TTTTGTCAATTCTGTTTGACAATGCCATAGAAGCCGCTTTGGAGTCTGCGGAGCCAAGAATCTCAGTCGCTAATTTTTAC
CAAGATGGTGATTTTGTTTTCATGATTGAGAATTCCACTAAGGAAAAATCGGTGGATTTAACTAAGATTTTTGAGCGTGG
CTACTCAACCAAAGGAGACAATCGTGGACTTGGTCTAGCGACACTGATGGATTTTCAAGATGACTACGAGAATTTGTCGG
TTGAAACCCACAGTTCAGATTACACATTCACACAAGTAGTGAGAATAGTATGA

Domains

Predicted by InterproScan.

• GHKL domain (HATPase_c_5) (212-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comD/comD2	Streptococcus equinus JB1	95.146	99.677	0.948
comD/comD3	Streptococcus equinus JB1	82.524	99.677	0.823
comD/blpH	Streptococcus mutans UA159	39.088	99.032	0.387
comD/comD1	Streptococcus equinus JB1	50.649	74.516	0.377