Detailed information NTG0403714

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: GL187_RS09900
• Genome accession: NZ_CP046379
• Coordinates: 1931306..1931710 (-)
• Length: 134 a.a.
• NCBI ID: WP_061647912.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 563
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1926306..1936710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL187_RS09865 (GL187_09985)	rnpA	1926728..1927099 (-)	372	WP_000739247.1	ribonuclease P protein component	-
GL187_RS11460	-	1927116..1927247 (-)	132	WP_000768904.1	hypothetical protein	-
GL187_RS09870 (GL187_09990)	-	1927248..1928438 (-)	1191	WP_000167765.1	acetate kinase	-
GL187_RS09875 (GL187_09995)	comYH	1928489..1929442 (-)	954	WP_000345122.1	class I SAM-dependent methyltransferase	Machinery gene
GL187_RS09880 (GL187_10005)	-	1929503..1930090 (-)	588	WP_000679779.1	class I SAM-dependent methyltransferase	-
GL187_RS09885 (GL187_10010)	comGG/cglG	1930193..1930639 (-)	447	WP_001811371.1	competence type IV pilus minor pilin ComGG	Machinery gene
GL187_RS09890 (GL187_10015)	comGF/cglF	1930617..1931078 (-)	462	WP_000250523.1	competence type IV pilus minor pilin ComGF	Machinery gene
GL187_RS09895 (GL187_10020)	comGE/cglE	1931041..1931343 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
GL187_RS09900 (GL187_10025)	comGD/cglD	1931306..1931710 (-)	405	WP_061647912.1	competence type IV pilus minor pilin ComGD	Machinery gene
GL187_RS09905 (GL187_10030)	comGC/cglC	1931703..1932029 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
GL187_RS09910 (GL187_10035)	comGB/cglB	1932031..1933047 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
GL187_RS09915 (GL187_10040)	comGA/cglA/cilD	1932995..1933936 (-)	942	WP_000249555.1	competence type IV pilus ATPase ComGA	Machinery gene
GL187_RS09920 (GL187_10045)	-	1934011..1934376 (-)	366	WP_000286415.1	DUF1033 family protein	-
GL187_RS09925 (GL187_10050)	-	1934527..1935585 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14696.86 Da
• Isoelectric Point: 10.0319

>NTDB_id=403714 GL187_RS09900 WP_061647912.1 1931306..1931710(-) (comGD/cglD) [Streptococcus pneumoniae strain 563]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLTV
PKGIQAPSDQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=403714 GL187_RS09900 WP_061647912.1 1931306..1931710(-) (comGD/cglD) [Streptococcus pneumoniae strain 563]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTATTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGTTTGTCTGGCTC
TGTTCAGTCCACTTTTGCAGCGGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTTTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGACCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478