Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | GL186_RS09135 | Genome accession | NZ_CP046358 |
| Coordinates | 1793468..1793863 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain 566 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1788468..1798863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GL186_RS09110 (GL186_09280) | - | 1788663..1789196 (+) | 534 | WP_000775321.1 | nucleoside tri-diphosphate phosphatase | - |
| GL186_RS09115 (GL186_09285) | - | 1789554..1789760 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| GL186_RS09120 (GL186_09290) | - | 1789920..1791176 (+) | 1257 | WP_197097797.1 | ISL3 family transposase | - |
| GL186_RS09125 (GL186_09295) | groL | 1791276..1792898 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| GL186_RS09130 (GL186_09300) | groES | 1792914..1793198 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| GL186_RS09135 (GL186_09305) | ssbB/cilA | 1793468..1793863 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| GL186_RS09140 (GL186_09310) | - | 1793940..1794701 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| GL186_RS09145 (GL186_09315) | ytpR | 1794734..1795360 (-) | 627 | WP_024477659.1 | YtpR family tRNA-binding protein | - |
| GL186_RS09150 (GL186_09320) | - | 1795376..1795693 (-) | 318 | WP_000615775.1 | thioredoxin family protein | - |
| GL186_RS09155 (GL186_09325) | - | 1795690..1795989 (-) | 300 | WP_001818001.1 | DUF4651 domain-containing protein | - |
| GL186_RS11195 | - | 1796083..1796229 (+) | 147 | WP_000692801.1 | hypothetical protein | - |
| GL186_RS09165 (GL186_09330) | - | 1796286..1796477 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| GL186_RS09170 (GL186_09335) | - | 1796638..1797312 (-) | 675 | WP_024477660.1 | LiaF transmembrane domain-containing protein | - |
| GL186_RS09175 (GL186_09340) | - | 1797318..1797764 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| GL186_RS09180 (GL186_09345) | - | 1797878..1798381 (-) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| GL186_RS09185 (GL186_09350) | - | 1798378..1798740 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=403272 GL186_RS09135 WP_000282467.1 1793468..1793863(-) (ssbB/cilA) [Streptococcus pneumoniae strain 566]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=403272 GL186_RS09135 WP_000282467.1 1793468..1793863(-) (ssbB/cilA) [Streptococcus pneumoniae strain 566]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |