Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | GL185_RS09275 | Genome accession | NZ_CP046357 |
| Coordinates | 1830689..1831084 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain 525 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1825689..1836084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GL185_RS09225 (GL185_09380) | - | 1825812..1826174 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| GL185_RS09230 (GL185_09385) | - | 1826171..1826674 (+) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| GL185_RS09235 (GL185_09390) | - | 1826788..1827234 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| GL185_RS09240 (GL185_09395) | - | 1827240..1827914 (+) | 675 | WP_024477660.1 | membrane protein | - |
| GL185_RS09245 (GL185_09400) | - | 1828075..1828266 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| GL185_RS11290 | - | 1828323..1828469 (-) | 147 | WP_000692801.1 | hypothetical protein | - |
| GL185_RS09255 (GL185_09405) | - | 1828563..1828862 (+) | 300 | WP_001818001.1 | DUF4651 domain-containing protein | - |
| GL185_RS09260 (GL185_09410) | - | 1828859..1829176 (+) | 318 | WP_000615775.1 | thioredoxin family protein | - |
| GL185_RS09265 (GL185_09415) | ytpR | 1829192..1829818 (+) | 627 | WP_024477659.1 | YtpR family tRNA-binding protein | - |
| GL185_RS09270 (GL185_09420) | - | 1829851..1830612 (+) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| GL185_RS09275 (GL185_09425) | ssbB/cilA | 1830689..1831084 (+) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| GL185_RS09280 (GL185_09430) | groES | 1831354..1831638 (+) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| GL185_RS09285 (GL185_09435) | groL | 1831654..1833276 (+) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| GL185_RS09290 (GL185_09440) | - | 1833376..1834605 (-) | 1230 | WP_000436406.1 | ISL3 family transposase | - |
| GL185_RS11465 | - | 1834766..1834972 (+) | 207 | WP_000775827.1 | transcriptional regulator | - |
| GL185_RS09300 (GL185_09450) | - | 1835330..1835863 (-) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=403211 GL185_RS09275 WP_000282467.1 1830689..1831084(+) (ssbB/cilA) [Streptococcus pneumoniae strain 525]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=403211 GL185_RS09275 WP_000282467.1 1830689..1831084(+) (ssbB/cilA) [Streptococcus pneumoniae strain 525]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |