Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | HUK67_RS25810 | Genome accession | NZ_CP054787 |
| Coordinates | 5452360..5452824 (-) | Length | 154 a.a. |
| NCBI ID | WP_023129290.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain HB2011305RE | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5447360..5457824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUK67_RS25795 (HUK67_25780) | nadC | 5449860..5450708 (+) | 849 | WP_003116246.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HUK67_RS25805 (HUK67_25790) | - | 5450889..5452202 (-) | 1314 | WP_015648064.1 | O-antigen ligase family protein | - |
| HUK67_RS25810 (HUK67_25795) | pilA/pilAI | 5452360..5452824 (-) | 465 | WP_023129290.1 | pilin | Machinery gene |
| HUK67_RS25815 (HUK67_25800) | pilB | 5453055..5454755 (+) | 1701 | WP_030048379.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| HUK67_RS25820 (HUK67_25805) | pilC | 5454759..5455976 (+) | 1218 | WP_015648061.1 | type II secretion system F family protein | Machinery gene |
| HUK67_RS25825 (HUK67_25810) | pilD | 5455977..5456849 (+) | 873 | WP_015648060.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| HUK67_RS25830 (HUK67_25815) | coaE | 5456846..5457457 (+) | 612 | WP_003094654.1 | dephospho-CoA kinase | - |
| HUK67_RS25835 (HUK67_25820) | yacG | 5457454..5457654 (+) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16148.47 Da Isoelectric Point: 8.9986
>NTDB_id=400857 HUK67_RS25810 WP_023129290.1 5452360..5452824(-) (pilA/pilAI) [Pseudomonas aeruginosa strain HB2011305RE]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWTCGITGSPTNWKANYAPANCPKS
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWTCGITGSPTNWKANYAPANCPKS
Nucleotide
Download Length: 465 bp
>NTDB_id=400857 HUK67_RS25810 WP_023129290.1 5452360..5452824(-) (pilA/pilAI) [Pseudomonas aeruginosa strain HB2011305RE]
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATATCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGACCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATATCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGACCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.516 |
100 |
0.448 |
| pilA | Acinetobacter baumannii strain A118 |
42.857 |
100 |
0.429 |
| pilA | Pseudomonas aeruginosa PAK |
41.139 |
100 |
0.422 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.059 |
100 |
0.409 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio cholerae strain A1552 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio cholerae C6706 |
39.073 |
98.052 |
0.383 |
| pilA2 | Legionella pneumophila str. Paris |
37.838 |
96.104 |
0.364 |