Detailed information NTG0040028

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SGGBAA2069_RS00845
• Genome accession: NC_015215
• Coordinates: 133602..133997 (+)
• Length: 131 a.a.
• NCBI ID: WP_009853250.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 128602..138997

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGGBAA2069_RS00815 (SGGBAA2069_c01170)	-	128747..129385 (+)	639	WP_009853241.1	CPBP family intramembrane glutamic endopeptidase	-
SGGBAA2069_RS00820 (SGGBAA2069_c01180)	proC	129445..130215 (-)	771	WP_009853242.1	pyrroline-5-carboxylate reductase	-
SGGBAA2069_RS00825 (SGGBAA2069_c01190)	pepA	130276..131343 (-)	1068	WP_009853243.1	glutamyl aminopeptidase	-
SGGBAA2069_RS12105	-	131461..131634 (+)	174	WP_012961333.1	hypothetical protein	-
SGGBAA2069_RS11855 (SGGBAA2069_c01200)	-	131622..131753 (+)	132	WP_009853245.1	DUF4651 domain-containing protein	-
SGGBAA2069_RS00830 (SGGBAA2069_c01210)	-	131746..132063 (+)	318	WP_009853246.1	thioredoxin family protein	-
SGGBAA2069_RS00835 (SGGBAA2069_c01220)	ytpR	132072..132698 (+)	627	WP_009853247.1	YtpR family tRNA-binding protein	-
SGGBAA2069_RS00840 (SGGBAA2069_c01230)	-	132785..133490 (-)	706	Protein_120	class I SAM-dependent methyltransferase	-
SGGBAA2069_RS00845 (SGGBAA2069_c01240)	ssbA	133602..133997 (+)	396	WP_009853250.1	single-stranded DNA-binding protein	Machinery gene
SGGBAA2069_RS00850 (SGGBAA2069_c01250)	-	134147..135190 (+)	1044	WP_009853251.1	YeeE/YedE family protein	-
SGGBAA2069_RS00855 (SGGBAA2069_c01260)	-	135193..135420 (+)	228	WP_009853252.1	sulfurtransferase TusA family protein	-
SGGBAA2069_RS00860 (SGGBAA2069_c01270)	-	135548..136348 (+)	801	WP_012961336.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14845.81 Da
• Isoelectric Point: 5.7916

>NTDB_id=40028 SGGBAA2069_RS00845 WP_009853250.1 133602..133997(+) (ssbA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MYNKVIIIGRLTAQPELVTTSNEKSVTRVTLAVNRRFKSQNGEREADFISVVVWGRLAETLVSYAGKGSLLSVDGELRTR
KYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=40028 SGGBAA2069_RS00845 WP_009853250.1 133602..133997(+) (ssbA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGTACAATAAAGTTATTATAATCGGGCGCTTGACAGCGCAGCCTGAGCTTGTGACGACGTCAAATGAAAAATCTGTTAC
ACGTGTAACACTAGCAGTCAACCGCCGTTTTAAATCACAAAATGGTGAGCGTGAGGCGGATTTTATTTCAGTTGTGGTTT
GGGGACGTTTGGCAGAAACTCTTGTTTCTTATGCTGGAAAAGGTAGTTTGCTTTCAGTAGATGGCGAGCTTCGCACACGC
AAATATGAAAAAGATGGTCACACGAATTATGTGACAGAAGTGCTTTGCCATTCTTTCCAACTTTTAGAAAGCCGTGCCCA
ACGTGCCATGCGAGAAAATAATGTGGCAAACGATCTCGCTGATTTAGTTTTAGAAGAGGAAGAATTACCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.802
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae Rx1	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae D39	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae R6	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae TIGR4	77.099	100	0.771
ssbB/cilA	Streptococcus mitis SK321	76.336	100	0.763
ssbB/cilA	Streptococcus mitis NCTC 12261	75.573	100	0.756
ssbB	Lactococcus lactis subsp. cremoris KW2	62.281	87.023	0.542
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	46.154	89.313	0.412