Detailed information NTG0387647

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: FOB78_RS11110
• Genome accession: NZ_CP044090
• Coordinates: 2088873..2089289 (+)
• Length: 138 a.a.
• NCBI ID: WP_000609565.1
• Uniprot ID: Q8DXI7
• Organism: Streptococcus agalactiae strain FDAARGOS_670
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2083873..2094289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB78_RS11070 (FOB78_11070)	-	2085165..2085767 (+)	603	WP_071661720.1	hypothetical protein	-
FOB78_RS11075 (FOB78_11075)	-	2085745..2086491 (+)	747	WP_000079054.1	conserved phage C-terminal domain-containing protein	-
FOB78_RS11080 (FOB78_11080)	-	2086492..2087313 (+)	822	WP_001067867.1	ATP-binding protein	-
FOB78_RS11085 (FOB78_11085)	-	2087313..2087375 (+)	63	Protein_2033	DNA cytosine methyltransferase	-
FOB78_RS11090 (FOB78_11090)	-	2087504..2087995 (+)	492	WP_000169322.1	MazG-like family protein	-
FOB78_RS11095 (FOB78_11095)	-	2087995..2088324 (+)	330	WP_000793494.1	DUF1372 family protein	-
FOB78_RS11800	-	2088453..2088680 (+)	228	WP_070467532.1	DUF3310 domain-containing protein	-
FOB78_RS11105 (FOB78_11105)	-	2088677..2088883 (+)	207	WP_000748199.1	hypothetical protein	-
FOB78_RS11110 (FOB78_11110)	ssb	2088873..2089289 (+)	417	WP_000609565.1	single-stranded DNA-binding protein	Machinery gene
FOB78_RS11120 (FOB78_11120)	ltrA	2089870..2091189 (+)	1320	WP_000561483.1	group II intron reverse transcriptase/maturase	-
FOB78_RS11125 (FOB78_11125)	-	2091322..2091582 (+)	261	WP_001008140.1	hypothetical protein	-
FOB78_RS11130 (FOB78_11130)	-	2091579..2091926 (+)	348	WP_000776714.1	helix-turn-helix domain-containing protein	-
FOB78_RS11135 (FOB78_11135)	-	2091923..2092387 (+)	465	WP_000163169.1	hypothetical protein	-
FOB78_RS11140 (FOB78_11140)	-	2092497..2093039 (+)	543	WP_001028147.1	site-specific integrase	-
FOB78_RS11145 (FOB78_11145)	-	2093329..2093616 (+)	288	WP_000651009.1	hypothetical protein	-
FOB78_RS11150 (FOB78_11150)	-	2093739..2093975 (+)	237	WP_223846017.1	HNH endonuclease	-

Sequence

Protein

• Length: 138 a.a.
• Molecular weight: 15674.52 Da
• Isoelectric Point: 4.6604

>NTDB_id=387647 FOB78_RS11110 WP_000609565.1 2088873..2089289(+) (ssb) [Streptococcus agalactiae strain FDAARGOS_670]
MINNVVLIGRLTRDVELRYTPSNIANATFNLAVNRNFKNAAGDREADFINCVMWRQQAENLANWTKKGMLIGITGRIQTR
SYENQQGQRIYVTEVVADSFQILEKRDNSTNQASMDDQLPPSFGNSQPMDISDDDLPF

Nucleotide

• Length: 417 bp

>NTDB_id=387647 FOB78_RS11110 WP_000609565.1 2088873..2089289(+) (ssb) [Streptococcus agalactiae strain FDAARGOS_670]
ATGATCAATAATGTTGTACTTATTGGCCGCTTGACAAGAGATGTTGAGCTACGTTACACGCCGTCAAACATCGCAAACGC
TACTTTTAACCTAGCAGTCAATCGAAATTTCAAGAATGCTGCTGGTGATCGTGAAGCTGATTTCATCAACTGTGTGATGT
GGCGACAACAAGCTGAAAACTTGGCCAATTGGACGAAAAAAGGAATGCTGATTGGTATTACTGGACGAATCCAGACAAGA
AGCTACGAAAATCAGCAAGGTCAGCGTATCTATGTGACTGAGGTTGTTGCTGACAGCTTCCAGATTCTTGAAAAGCGTGA
TAATTCAACGAACCAGGCAAGCATGGATGACCAATTGCCACCATCATTTGGAAATAGTCAGCCTATGGATATTTCAGATG
ATGATCTACCGTTTTGA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Latilactobacillus sakei subsp. sakei 23K	54.118	100	0.667
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.575	100	0.638
ssbB/cilA	Streptococcus pneumoniae TIGR4	41.259	100	0.428
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.717	76.812	0.42
ssbB/cilA	Streptococcus pneumoniae R6	40.559	100	0.42
ssbB/cilA	Streptococcus mitis SK321	40.559	100	0.42
ssbB/cilA	Streptococcus mitis NCTC 12261	40.559	100	0.42
ssbB/cilA	Streptococcus pneumoniae Rx1	40.559	100	0.42
ssbB/cilA	Streptococcus pneumoniae D39	40.559	100	0.42
ssbB	Streptococcus sobrinus strain NIDR 6715-7	50.943	76.812	0.391