Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | HBA50_RS03140 | Genome accession | NZ_CP050133 |
| Coordinates | 613183..613407 (+) | Length | 74 a.a. |
| NCBI ID | WP_045501079.1 | Uniprot ID | - |
| Organism | Streptococcus cristatus ATCC 51100 | ||
| Function | activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 608183..618407
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA50_RS03120 (HBA50_03120) | - | 608873..609826 (+) | 954 | WP_005589507.1 | branched-chain amino acid ABC transporter permease | - |
| HBA50_RS03125 (HBA50_03125) | - | 609826..610590 (+) | 765 | WP_005589509.1 | ABC transporter ATP-binding protein | - |
| HBA50_RS03130 (HBA50_03130) | - | 610590..611300 (+) | 711 | WP_045501076.1 | ABC transporter ATP-binding protein | - |
| HBA50_RS03135 (HBA50_03135) | - | 612119..612961 (+) | 843 | WP_045501078.1 | NAD(P)H-hydrate dehydratase | - |
| HBA50_RS03140 (HBA50_03140) | comR | 613183..613407 (+) | 225 | WP_045501079.1 | helix-turn-helix domain-containing protein | Regulator |
| HBA50_RS03145 (HBA50_03145) | xseA | 613509..614849 (+) | 1341 | WP_045501081.1 | exodeoxyribonuclease VII large subunit | - |
| HBA50_RS03150 (HBA50_03150) | - | 614827..615039 (+) | 213 | WP_045501082.1 | exodeoxyribonuclease VII small subunit | - |
| HBA50_RS03155 (HBA50_03155) | - | 615036..615911 (+) | 876 | WP_045501084.1 | polyprenyl synthetase family protein | - |
| HBA50_RS03160 (HBA50_03160) | - | 615904..616728 (+) | 825 | WP_045501086.1 | TlyA family RNA methyltransferase | - |
| HBA50_RS03165 (HBA50_03165) | - | 616712..617143 (+) | 432 | WP_045501088.1 | arginine repressor | - |
Sequence
Protein
Download Length: 74 a.a. Molecular weight: 8700.20 Da Isoelectric Point: 8.0168
>NTDB_id=376892 HBA50_RS03140 WP_045501079.1 613183..613407(+) (comR) [Streptococcus cristatus ATCC 51100]
MSELRIAIGKKIRELREQRKMTRELLCEDETRLTVRQLARIEAGDSIPSLLTLEFIAQQLHIEMYQIIKESTKS
MSELRIAIGKKIRELREQRKMTRELLCEDETRLTVRQLARIEAGDSIPSLLTLEFIAQQLHIEMYQIIKESTKS
Nucleotide
Download Length: 225 bp
>NTDB_id=376892 HBA50_RS03140 WP_045501079.1 613183..613407(+) (comR) [Streptococcus cristatus ATCC 51100]
ATGTCAGAGTTAAGGATAGCAATTGGAAAAAAAATTCGAGAACTGCGGGAACAACGGAAAATGACAAGAGAATTGCTGTG
TGAAGATGAGACTCGTTTGACAGTCAGACAGCTTGCTCGGATCGAGGCAGGCGATTCGATTCCTAGTTTACTAACCTTAG
AATTCATTGCGCAACAGTTGCATATCGAAATGTATCAAATTATCAAGGAAAGTACAAAATCTTAG
ATGTCAGAGTTAAGGATAGCAATTGGAAAAAAAATTCGAGAACTGCGGGAACAACGGAAAATGACAAGAGAATTGCTGTG
TGAAGATGAGACTCGTTTGACAGTCAGACAGCTTGCTCGGATCGAGGCAGGCGATTCGATTCCTAGTTTACTAACCTTAG
AATTCATTGCGCAACAGTTGCATATCGAAATGTATCAAATTATCAAGGAAAGTACAAAATCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus thermophilus LMD-9 |
44.928 |
93.243 |
0.419 |
| comR | Streptococcus salivarius strain HSISS4 |
48.387 |
83.784 |
0.405 |
| comR | Streptococcus thermophilus LMG 18311 |
43.478 |
93.243 |
0.405 |
| comR | Streptococcus salivarius SK126 |
50 |
78.378 |
0.392 |
| comR | Streptococcus pyogenes MGAS315 |
50.877 |
77.027 |
0.392 |
| comR | Streptococcus pyogenes MGAS8232 |
52.727 |
74.324 |
0.392 |
| comR | Streptococcus suis D9 |
44.444 |
85.135 |
0.378 |
| comR | Streptococcus suis P1/7 |
44.444 |
85.135 |
0.378 |
| comR | Streptococcus suis 05ZYH33 |
44.444 |
85.135 |
0.378 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
48.214 |
75.676 |
0.365 |
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
44.262 |
82.432 |
0.365 |