Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | FPZ22_RS09900 | Genome accession | NZ_CP042218 |
| Coordinates | 2152327..2152770 (-) | Length | 147 a.a. |
| NCBI ID | WP_144892587.1 | Uniprot ID | A0A518N5G8 |
| Organism | Luteimonas granuli strain Gr-4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2147327..2157770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPZ22_RS09885 (FPZ22_09885) | - | 2148350..2149852 (-) | 1503 | WP_144892580.1 | hypothetical protein | - |
| FPZ22_RS09890 (FPZ22_09890) | - | 2149849..2150463 (-) | 615 | WP_144892583.1 | hypothetical protein | - |
| FPZ22_RS09895 (FPZ22_09895) | - | 2150479..2152239 (-) | 1761 | WP_144892585.1 | phosphoethanolamine transferase | - |
| FPZ22_RS09900 (FPZ22_09900) | pilA2 | 2152327..2152770 (-) | 444 | WP_144892587.1 | pilin | Machinery gene |
| FPZ22_RS09905 (FPZ22_09905) | - | 2153226..2153888 (+) | 663 | WP_168198981.1 | class I SAM-dependent methyltransferase | - |
| FPZ22_RS09910 (FPZ22_09910) | - | 2153885..2154616 (+) | 732 | WP_144892591.1 | methyltransferase domain-containing protein | - |
| FPZ22_RS09915 (FPZ22_09915) | - | 2154778..2155833 (+) | 1056 | WP_246120688.1 | XRE family transcriptional regulator | - |
| FPZ22_RS09920 (FPZ22_09920) | - | 2155843..2156349 (+) | 507 | WP_144892594.1 | hypothetical protein | - |
| FPZ22_RS09925 (FPZ22_09925) | pilR | 2156350..2157756 (-) | 1407 | WP_144892596.1 | sigma-54 dependent transcriptional regulator | Regulator |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 14906.98 Da Isoelectric Point: 7.7765
>NTDB_id=376064 FPZ22_RS09900 WP_144892587.1 2152327..2152770(-) (pilA2) [Luteimonas granuli strain Gr-4]
MKKMQQGFTLIELMIVVAIIAILAAIALPAYQDYLIKSRVSEVMIAASSARTSVSEAAAADTTNNMPTTVPIENQSSKYV
SGVVYAGSGTTGTITATAQNLGGTAAGNIVLTGTKAANGQVDWTCSGSIDAKYRPATCQAAAGSGSP
MKKMQQGFTLIELMIVVAIIAILAAIALPAYQDYLIKSRVSEVMIAASSARTSVSEAAAADTTNNMPTTVPIENQSSKYV
SGVVYAGSGTTGTITATAQNLGGTAAGNIVLTGTKAANGQVDWTCSGSIDAKYRPATCQAAAGSGSP
Nucleotide
Download Length: 444 bp
>NTDB_id=376064 FPZ22_RS09900 WP_144892587.1 2152327..2152770(-) (pilA2) [Luteimonas granuli strain Gr-4]
ATGAAGAAGATGCAGCAGGGCTTCACCCTGATCGAACTGATGATCGTGGTCGCGATCATCGCCATCCTGGCGGCGATCGC
GCTGCCGGCGTACCAGGACTACCTGATCAAGAGCCGCGTGTCGGAAGTAATGATCGCGGCTTCTTCGGCACGCACCAGCG
TCTCCGAAGCGGCCGCCGCTGATACTACCAACAACATGCCCACCACCGTCCCGATCGAGAATCAGTCCTCGAAGTATGTT
TCTGGCGTGGTCTATGCTGGTTCCGGCACCACCGGCACCATCACCGCCACTGCCCAAAATCTGGGCGGAACTGCGGCCGG
CAACATCGTCCTTACTGGCACCAAGGCTGCCAATGGCCAGGTCGACTGGACCTGCAGCGGCTCAATTGATGCGAAGTATC
GCCCCGCCACCTGCCAAGCCGCCGCTGGTAGCGGTAGCCCCTAA
ATGAAGAAGATGCAGCAGGGCTTCACCCTGATCGAACTGATGATCGTGGTCGCGATCATCGCCATCCTGGCGGCGATCGC
GCTGCCGGCGTACCAGGACTACCTGATCAAGAGCCGCGTGTCGGAAGTAATGATCGCGGCTTCTTCGGCACGCACCAGCG
TCTCCGAAGCGGCCGCCGCTGATACTACCAACAACATGCCCACCACCGTCCCGATCGAGAATCAGTCCTCGAAGTATGTT
TCTGGCGTGGTCTATGCTGGTTCCGGCACCACCGGCACCATCACCGCCACTGCCCAAAATCTGGGCGGAACTGCGGCCGG
CAACATCGTCCTTACTGGCACCAAGGCTGCCAATGGCCAGGTCGACTGGACCTGCAGCGGCTCAATTGATGCGAAGTATC
GCCCCGCCACCTGCCAAGCCGCCGCTGGTAGCGGTAGCCCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
51.064 |
95.918 |
0.49 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
50.355 |
95.918 |
0.483 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.702 |
100 |
0.469 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
41.566 |
100 |
0.469 |
| comP | Acinetobacter baylyi ADP1 |
43.333 |
100 |
0.442 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.312 |
100 |
0.401 |
| pilE | Neisseria gonorrhoeae MS11 |
34.146 |
100 |
0.381 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
33.133 |
100 |
0.374 |
| pilA | Pseudomonas aeruginosa PAK |
35.099 |
100 |
0.361 |