Detailed information NTG0375700

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: FP484_RS10785
• Genome accession: NZ_CP042107
• Coordinates: 2165232..2165543 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472253.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain B8-13D
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2160232..2170543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FP484_RS10750 (FP484_10750)	gcvPA	2160734..2162080 (-)	1347	WP_000019691.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
FP484_RS10755 (FP484_10755)	gcvT	2162100..2163191 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
FP484_RS10760 (FP484_10760)	-	2163350..2163874 (-)	525	WP_001015120.1	shikimate kinase	-
FP484_RS10765 (FP484_10765)	-	2163864..2164010 (-)	147	WP_001792109.1	hypothetical protein	-
FP484_RS10770 (FP484_10770)	comGF	2164107..2164604 (-)	498	WP_001788897.1	competence type IV pilus minor pilin ComGF	Machinery gene
FP484_RS10775 (FP484_10775)	comGE	2164522..2164821 (-)	300	WP_000844410.1	hypothetical protein	Machinery gene
FP484_RS10780 (FP484_10780)	comGD	2164808..2165254 (-)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
FP484_RS10785 (FP484_10785)	comGC	2165232..2165543 (-)	312	WP_000472253.1	competence type IV pilus major pilin ComGC	Machinery gene
FP484_RS10790 (FP484_10790)	comGB	2165557..2166627 (-)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
FP484_RS10795 (FP484_10795)	comGA	2166599..2167573 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
FP484_RS10800 (FP484_10800)	-	2167625..2168248 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
FP484_RS10805 (FP484_10805)	-	2168245..2168574 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
FP484_RS10810 (FP484_10810)	-	2168574..2169560 (-)	987	WP_000161314.1	ROK family glucokinase	-
FP484_RS10815 (FP484_10815)	-	2169557..2169760 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.40 Da
• Isoelectric Point: 9.1992

>NTDB_id=375700 FP484_RS10785 WP_000472253.1 2165232..2165543(-) (comGC) [Staphylococcus aureus strain B8-13D]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKKTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=375700 FP484_RS10785 WP_000472253.1 2165232..2165543(-) (comGC) [Staphylococcus aureus strain B8-13D]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAAAAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae TIGR4	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae Rx1	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae D39	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae R6	45.098	99.029	0.447
comGC/cglC	Streptococcus mitis NCTC 12261	50	83.495	0.417
comGC/cglC	Streptococcus mitis SK321	50	83.495	0.417
comYC	Streptococcus gordonii str. Challis substr. CH1	41.837	95.146	0.398
comYC	Streptococcus suis isolate S10	48.718	75.728	0.369
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369