Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | FP478_RS08995 | Genome accession | NZ_CP042043 |
| Coordinates | 1831019..1831330 (-) | Length | 103 a.a. |
| NCBI ID | WP_000472253.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain B2-15A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1826019..1836330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FP478_RS08960 (FP478_08960) | gcvPA | 1826521..1827867 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| FP478_RS08965 (FP478_08965) | gcvT | 1827887..1828978 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| FP478_RS08970 (FP478_08970) | - | 1829137..1829661 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| FP478_RS08975 (FP478_08975) | - | 1829651..1829797 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| FP478_RS08980 (FP478_08980) | comGF | 1829894..1830391 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FP478_RS08985 (FP478_08985) | comGE | 1830309..1830608 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| FP478_RS08990 (FP478_08990) | comGD | 1830595..1831041 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FP478_RS08995 (FP478_08995) | comGC | 1831019..1831330 (-) | 312 | WP_000472253.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FP478_RS09000 (FP478_09000) | comGB | 1831344..1832414 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FP478_RS09005 (FP478_09005) | comGA | 1832386..1833360 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FP478_RS09010 (FP478_09010) | - | 1833412..1834035 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| FP478_RS09015 (FP478_09015) | - | 1834032..1834361 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| FP478_RS09020 (FP478_09020) | - | 1834361..1835347 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| FP478_RS09025 (FP478_09025) | - | 1835344..1835547 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.40 Da Isoelectric Point: 9.1992
>NTDB_id=375617 FP478_RS08995 WP_000472253.1 1831019..1831330(-) (comGC) [Staphylococcus aureus strain B2-15A]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKKTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKKTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=375617 FP478_RS08995 WP_000472253.1 1831019..1831330(-) (comGC) [Staphylococcus aureus strain B2-15A]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAAAAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAAAAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae D39 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae R6 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus mitis SK321 |
50 |
83.495 |
0.417 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
41.837 |
95.146 |
0.398 |
| comYC | Streptococcus suis isolate S10 |
48.718 |
75.728 |
0.369 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |