Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | G5571_RS01625 | Genome accession | NZ_CP049314 |
| Coordinates | 353149..353622 (+) | Length | 157 a.a. |
| NCBI ID | WP_000993729.1 | Uniprot ID | A0A0D5YCX7 |
| Organism | Acinetobacter baumannii strain Ex003 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 348149..358622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5571_RS01605 (G5571_00318) | - | 349537..350424 (+) | 888 | WP_001017320.1 | metal-dependent hydrolase | - |
| G5571_RS01610 (G5571_00319) | - | 350555..351145 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| G5571_RS01615 (G5571_00320) | - | 351167..352249 (+) | 1083 | WP_001246387.1 | TPM domain-containing protein | - |
| G5571_RS01620 (G5571_00321) | - | 352243..352803 (+) | 561 | WP_000258946.1 | TPM domain-containing protein | - |
| G5571_RS01625 (G5571_00322) | pilA | 353149..353622 (+) | 474 | WP_000993729.1 | pilin | Machinery gene |
| G5571_RS01630 (G5571_00323) | - | 353867..355495 (+) | 1629 | WP_001195775.1 | PglL family O-oligosaccharyltransferase | - |
| G5571_RS01635 (G5571_00324) | bfr | 355538..356002 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| G5571_RS01640 (G5571_00325) | - | 356247..356441 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| G5571_RS01645 (G5571_00326) | - | 356651..357034 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 15793.78 Da Isoelectric Point: 4.4982
>NTDB_id=373428 G5571_RS01625 WP_000993729.1 353149..353622(+) (pilA) [Acinetobacter baumannii strain Ex003]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
Nucleotide
Download Length: 474 bp
>NTDB_id=373428 G5571_RS01625 WP_000993729.1 353149..353622(+) (pilA) [Acinetobacter baumannii strain Ex003]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
44.099 |
100 |
0.452 |
| pilA | Pseudomonas aeruginosa PAK |
42.581 |
98.726 |
0.42 |
| comP | Acinetobacter baylyi ADP1 |
39.873 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.176 |
97.452 |
0.401 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
37.58 |
100 |
0.376 |
| pilA | Vibrio cholerae strain A1552 |
37.58 |
100 |
0.376 |
| pilA | Vibrio cholerae C6706 |
37.58 |
100 |
0.376 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.562 |
97.452 |
0.376 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
37.179 |
99.363 |
0.369 |