Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | FLP15_RS04845 | Genome accession | NZ_CP041356 |
| Coordinates | 974927..975316 (+) | Length | 129 a.a. |
| NCBI ID | WP_120773173.1 | Uniprot ID | A0A514Z7Q9 |
| Organism | Lactococcus protaetiae strain KACC 19320 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 969927..980316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FLP15_RS04820 (FLP15_04820) | - | 970641..971177 (-) | 537 | WP_223804730.1 | GNAT family N-acetyltransferase | - |
| FLP15_RS04825 (FLP15_04825) | pepA | 971403..972470 (-) | 1068 | WP_142766212.1 | glutamyl aminopeptidase | - |
| FLP15_RS04830 (FLP15_04830) | - | 973300..973593 (+) | 294 | WP_142766213.1 | hypothetical protein | - |
| FLP15_RS04835 (FLP15_04835) | - | 973626..973943 (+) | 318 | WP_120773171.1 | thioredoxin family protein | - |
| FLP15_RS04840 (FLP15_04840) | ytpR | 974033..974668 (+) | 636 | WP_142766214.1 | YtpR family tRNA-binding protein | - |
| FLP15_RS04845 (FLP15_04845) | ssbB | 974927..975316 (+) | 390 | WP_120773173.1 | single-stranded DNA-binding protein | Machinery gene |
| FLP15_RS04850 (FLP15_04850) | groES | 976066..976350 (+) | 285 | WP_142766215.1 | co-chaperone GroES | - |
| FLP15_RS04855 (FLP15_04855) | groL | 976535..978157 (+) | 1623 | WP_142766216.1 | chaperonin GroEL | - |
| FLP15_RS04860 (FLP15_04860) | - | 978408..979220 (-) | 813 | WP_142766217.1 | MBL fold metallo-hydrolase | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14701.62 Da Isoelectric Point: 7.0186
>NTDB_id=371494 FLP15_RS04845 WP_120773173.1 974927..975316(+) (ssbB) [Lactococcus protaetiae strain KACC 19320]
MNKTMLIGRLTSSAELSKTSNDKSYTRITLAVNRRFKNENGEREADFISVVFWGKLAETLSSYSKKGTLISVEGEIRTRN
YTDKSNQKHYVTEILGMNYDLLESRATIALRENAAKTEEILLEAEELPF
MNKTMLIGRLTSSAELSKTSNDKSYTRITLAVNRRFKNENGEREADFISVVFWGKLAETLSSYSKKGTLISVEGEIRTRN
YTDKSNQKHYVTEILGMNYDLLESRATIALRENAAKTEEILLEAEELPF
Nucleotide
Download Length: 390 bp
>NTDB_id=371494 FLP15_RS04845 WP_120773173.1 974927..975316(+) (ssbB) [Lactococcus protaetiae strain KACC 19320]
ATGAATAAAACAATGCTCATCGGCAGACTCACTAGTTCAGCCGAACTATCGAAAACGTCAAATGACAAATCCTACACTCG
TATCACATTAGCCGTTAATCGCCGTTTTAAAAATGAAAATGGTGAACGAGAAGCAGATTTTATCTCAGTAGTATTTTGGG
GAAAATTAGCAGAAACGCTTTCTTCTTATTCCAAAAAAGGAACGCTTATCTCTGTAGAAGGAGAAATAAGAACTCGAAAC
TATACAGATAAATCCAATCAGAAACACTATGTCACTGAAATTTTGGGAATGAACTACGACCTACTTGAAAGTAGAGCAAC
GATTGCTTTAAGAGAAAACGCAGCAAAGACGGAAGAAATATTACTCGAAGCCGAAGAATTACCTTTCTAA
ATGAATAAAACAATGCTCATCGGCAGACTCACTAGTTCAGCCGAACTATCGAAAACGTCAAATGACAAATCCTACACTCG
TATCACATTAGCCGTTAATCGCCGTTTTAAAAATGAAAATGGTGAACGAGAAGCAGATTTTATCTCAGTAGTATTTTGGG
GAAAATTAGCAGAAACGCTTTCTTCTTATTCCAAAAAAGGAACGCTTATCTCTGTAGAAGGAGAAATAAGAACTCGAAAC
TATACAGATAAATCCAATCAGAAACACTATGTCACTGAAATTTTGGGAATGAACTACGACCTACTTGAAAGTAGAGCAAC
GATTGCTTTAAGAGAAAACGCAGCAAAGACGGAAGAAATATTACTCGAAGCCGAAGAATTACCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
79.845 |
100 |
0.798 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
62.308 |
100 |
0.628 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
60.769 |
100 |
0.612 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
60 |
100 |
0.605 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
60 |
100 |
0.605 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
60 |
100 |
0.605 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
60 |
100 |
0.605 |
| ssbB/cilA | Streptococcus mitis SK321 |
60 |
100 |
0.605 |
| ssbA | Streptococcus mutans UA159 |
56.923 |
100 |
0.574 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
42.5 |
93.023 |
0.395 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
40.87 |
89.147 |
0.364 |