Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FHI56_RS02650 | Genome accession | NZ_CP040804 |
| Coordinates | 301601..301993 (+) | Length | 130 a.a. |
| NCBI ID | WP_014632554.1 | Uniprot ID | A0AB37DE84 |
| Organism | Streptococcus salivarius strain LAB813 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 296601..306993
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FHI56_RS02620 (FHI56_02620) | pepA | 297285..298352 (-) | 1068 | WP_014632550.1 | glutamyl aminopeptidase | - |
| FHI56_RS02625 (FHI56_02625) | - | 298452..298736 (+) | 285 | WP_002885838.1 | DUF4651 domain-containing protein | - |
| FHI56_RS02630 (FHI56_02630) | - | 298733..299047 (+) | 315 | WP_002885723.1 | thioredoxin family protein | - |
| FHI56_RS02635 (FHI56_02635) | - | 299051..299575 (+) | 525 | WP_014632552.1 | hypothetical protein | - |
| FHI56_RS02640 (FHI56_02640) | ytpR | 299607..300230 (+) | 624 | WP_002885779.1 | YtpR family tRNA-binding protein | - |
| FHI56_RS02645 (FHI56_02645) | - | 300496..301173 (+) | 678 | WP_045001371.1 | CPBP family intramembrane glutamic endopeptidase | - |
| FHI56_RS02650 (FHI56_02650) | ssbA | 301601..301993 (+) | 393 | WP_014632554.1 | single-stranded DNA-binding protein | Machinery gene |
| FHI56_RS02655 (FHI56_02655) | tadA | 302763..303281 (+) | 519 | WP_014632555.1 | tRNA adenosine(34) deaminase TadA | - |
| FHI56_RS02660 (FHI56_02660) | - | 303367..303621 (-) | 255 | WP_045001373.1 | hypothetical protein | - |
| FHI56_RS02665 (FHI56_02665) | - | 303669..303836 (-) | 168 | WP_002885883.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| FHI56_RS02670 (FHI56_02670) | - | 303856..304014 (-) | 159 | WP_080610964.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| FHI56_RS02680 (FHI56_02680) | - | 304435..305274 (+) | 840 | WP_003092095.1 | methyltransferase domain-containing protein | - |
| FHI56_RS02685 (FHI56_02685) | - | 305388..306140 (+) | 753 | WP_003092016.1 | HAD family hydrolase | - |
| FHI56_RS02690 (FHI56_02690) | dapD | 306226..306924 (+) | 699 | WP_002886999.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 14759.71 Da Isoelectric Point: 6.9843
>NTDB_id=367335 FHI56_RS02650 WP_014632554.1 301601..301993(+) (ssbA) [Streptococcus salivarius strain LAB813]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
Nucleotide
Download Length: 393 bp
>NTDB_id=367335 FHI56_RS02650 WP_014632554.1 301601..301993(+) (ssbA) [Streptococcus salivarius strain LAB813]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.815 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
75.573 |
100 |
0.762 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus mitis SK321 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
73.282 |
100 |
0.738 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.714 |
86.154 |
0.523 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
47.17 |
81.538 |
0.385 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.226 |
81.538 |
0.377 |