Detailed information NTG0348849

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: EYZ66_RS10640
• Genome accession: NZ_CP036423
• Coordinates: 2377746..2378957 (+)
• Length: 403 a.a.
• NCBI ID: WP_160195670.1
• Uniprot ID: -
• Organism: Aequoribacter fuscus strain IMCC3088
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2372746..2383957

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYZ66_RS10630 (EYZ66_10630)	-	2375276..2375743 (-)	468	WP_040816565.1	pilin	-
EYZ66_RS10635 (EYZ66_10635)	pilB	2375995..2377731 (+)	1737	WP_009575691.1	type IV-A pilus assembly ATPase PilB	Machinery gene
EYZ66_RS10640 (EYZ66_10640)	pilC	2377746..2378957 (+)	1212	WP_160195670.1	type II secretion system F family protein	Machinery gene
EYZ66_RS10645 (EYZ66_10645)	pilD	2378976..2379833 (+)	858	WP_009575689.1	A24 family peptidase	Machinery gene
EYZ66_RS10650 (EYZ66_10650)	coaE	2379841..2380431 (+)	591	WP_009575688.1	dephospho-CoA kinase	-
EYZ66_RS10655 (EYZ66_10655)	mutT	2380414..2380836 (-)	423	WP_009575687.1	8-oxo-dGTP diphosphatase MutT	-
EYZ66_RS10660 (EYZ66_10660)	argJ	2380817..2382013 (-)	1197	WP_009575686.1	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	-

Sequence

Protein

• Length: 403 a.a.
• Molecular weight: 43293.67 Da
• Isoelectric Point: 9.4843

>NTDB_id=348849 EYZ66_RS10640 WP_160195670.1 2377746..2378957(+) (pilC) [Aequoribacter fuscus strain IMCC3088]
MAAKTFEFIWVGTDKRGKETNGELEATSVSLAKAQLRRRGINVKSIKKKAKPLFGGGGKKIKAADIALFTRQLATMMKAG
VPLIQSFEIVADGIENPRMRSMVNSIRGDVAAGNALAGALGKHKDQFDELFCSLVNSGENSGTLETMLDRVATYKEKTEQ
LKAKIKKAMTYPIAVVIVALAVTSLLLIKVVPQFAETFQSFGSELPAFTLFVLNISYFAQDYYLIIFGAIAIAVVLFNRA
KKTSPAFNDRLDEIALKAPIVGTIVHDAVIARFSRTLSTTFAAGVPLVEALESTAGATGNSVYKKAVLRIRDDVTGGSSL
YAAIKSSGLFPNMLLQMVSIGEESGALDEMLDKVANHYEEAVDNAVDSLSSLMEPMIMAVLGVLVGGLMVAMYLPIFMLG
SVV

Nucleotide

• Length: 1212 bp

>NTDB_id=348849 EYZ66_RS10640 WP_160195670.1 2377746..2378957(+) (pilC) [Aequoribacter fuscus strain IMCC3088]
ATGGCAGCAAAGACCTTTGAATTTATTTGGGTTGGCACCGACAAGCGCGGCAAAGAAACCAACGGCGAGCTTGAAGCGAC
CTCGGTAAGCCTCGCTAAGGCGCAGCTTCGCCGTCGCGGCATCAACGTCAAATCGATCAAGAAAAAGGCCAAGCCCCTAT
TCGGCGGTGGCGGTAAAAAAATCAAGGCCGCTGATATCGCCTTGTTCACCCGCCAGCTTGCGACCATGATGAAAGCGGGC
GTACCGCTGATTCAAAGCTTTGAAATTGTTGCAGACGGCATAGAAAACCCCAGAATGCGTAGCATGGTAAACAGTATTCG
CGGCGATGTGGCGGCGGGTAACGCCTTGGCCGGCGCACTGGGTAAGCACAAGGACCAGTTTGACGAGCTGTTCTGCTCGT
TAGTTAACTCGGGCGAAAACTCAGGTACGCTCGAGACCATGCTCGACCGCGTAGCGACCTACAAAGAAAAAACCGAGCAG
CTAAAAGCCAAAATTAAAAAGGCCATGACTTACCCCATTGCGGTTGTCATTGTGGCCTTGGCCGTGACCTCGTTGCTGCT
GATTAAGGTCGTACCTCAGTTTGCGGAAACCTTTCAAAGCTTTGGCTCTGAGCTACCCGCGTTTACCCTATTTGTATTGA
ACATCTCGTATTTCGCGCAAGACTACTACCTGATTATTTTTGGGGCTATAGCCATAGCGGTGGTCTTATTTAACCGCGCC
AAAAAAACCTCACCCGCATTTAACGACCGTCTAGACGAAATCGCGCTCAAAGCTCCGATAGTCGGCACCATCGTGCACGA
TGCGGTCATCGCTCGTTTCTCACGCACGCTATCAACCACCTTTGCGGCGGGCGTACCCTTAGTCGAGGCTTTAGAATCCA
CCGCCGGCGCGACGGGCAACTCGGTTTACAAAAAGGCCGTGCTGCGCATTCGCGATGACGTGACCGGGGGTTCTTCGCTG
TACGCCGCTATTAAATCGAGCGGCTTGTTCCCCAATATGCTGCTGCAGATGGTGAGTATCGGTGAGGAATCGGGTGCCTT
AGATGAAATGCTCGACAAGGTAGCCAACCACTACGAAGAAGCCGTAGATAATGCGGTCGACAGCCTAAGCTCTTTGATGG
AACCCATGATCATGGCGGTACTGGGTGTGCTGGTCGGCGGCCTGATGGTTGCGATGTATCTGCCCATCTTTATGTTAGGA
TCAGTGGTTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (69-192)

• Type II secretion system (T2SS), protein F (T2SSF) (273-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Acinetobacter baylyi ADP1	58.578	100	0.593
pilC	Acinetobacter baumannii D1279779	59.194	98.511	0.583
pilC	Pseudomonas stutzeri DSM 10701	58.209	99.752	0.581
pilC	Legionella pneumophila strain ERS1305867	55.556	98.263	0.546
pilG	Neisseria gonorrhoeae MS11	45.567	100	0.459
pilG	Neisseria meningitidis 44/76-A	45.567	100	0.459
pilC	Vibrio cholerae strain A1552	43.182	98.263	0.424
pilC	Vibrio campbellii strain DS40M4	39.95	100	0.4
pilC	Thermus thermophilus HB27	36.691	100	0.38